Methylibium sp. Pch-M: C1M51_12115
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Entry
C1M51_12115 CDS
T05827
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
metp
Methylibium sp. Pch-M
Pathway
metp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
metp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
C1M51_12115 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
metp01007
]
C1M51_12115 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
metp03016
]
C1M51_12115 (lysS)
Enzymes [BR:
metp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
C1M51_12115 (lysS)
Amino acid related enzymes [BR:
metp01007
]
Aminoacyl-tRNA synthetase
Class II (A)
C1M51_12115 (lysS)
Transfer RNA biogenesis [BR:
metp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
C1M51_12115 (lysS)
Prokaryotic type
Other AARSs
C1M51_12115 (lysS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
DNA_Packaging
Motif
Other DBs
NCBI-ProteinID:
QAZ40106
LinkDB
All DBs
Position
complement(2518874..2520400)
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AA seq
508 aa
AA seq
DB search
MTTTPPNAATPGTDDNQLIAERREKLAALRAQAQATGRAAFPNDFKPGDHAVDLHRLHEG
KSAEELEALAIPARIAGRMMLKRVMGKACFATLQDGSGRIQLYITSDAVGPEALAAFKHW
DLGDILGAEGTLFKTRTGELSLKVGTIRLLTKSLRPLPDKFHGMADQELKYRQREVDLIM
DEASRERFRARSKAVSSIRQFMVEHGFLEVETPMLHPIPGGANAKPFVTHHNALDQQMFL
RIAPELYLKRLVVGGFERVFEINRNFRNEGVSVRHNPEFTMMEFYAAYWTHHDLMDFTEQ
ILRHAARKAVGTAQLAYGGQAVDLESPFARLSVRDSLVAHAGLSAAEAVDSTVLRAKLEA
HGEKAPAHWSLAELQFGLFEAAVEEKLWQPTFIVDYPVEVSPLARASDADPTITERFELF
ITGREFGNGFSELNDPEDQAARFAAQASNKDAGDEEAMYFDADYIRALEHGLPPTGGCGI
GIDRLMMLLTDSPNIRDVILFPALRREG
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccacgcccccgaacgccgccacgcccggcaccgacgacaaccagctgatcgcc
gaacgccgcgagaagcttgctgcactgcgtgcgcaggcccaggccacggggagagccgcc
ttccccaatgacttcaagccgggcgaccacgccgtcgacctgcaccgcctgcacgagggc
aagagcgccgaggagctggaggcgctggccatcccggcccgcatcgccggccgcatgatg
ctcaagcgcgtgatgggcaaggcctgcttcgcgacgctgcaggacggctcgggccgcatc
cagctctacatcacgtccgacgccgtcggcccggaggcactggccgccttcaagcactgg
gacctgggcgacatccttggcgccgagggcacgctgttcaagacccgcaccggcgagctg
agcctcaaggtcggcacgatccgcctgctgaccaagagcctgcggccgctgcccgacaag
ttccacggcatggccgaccaggagctcaagtaccgccagcgcgaggtcgacctgatcatg
gacgaggcctcgcgcgagcgcttccgcgcgcgcagcaaggccgtgagctcgatccggcag
ttcatggtcgagcacggcttcctcgaggtcgagacgccgatgctgcaccccatccccggc
ggcgcgaacgccaagcccttcgtgacgcaccacaacgcgctcgaccagcagatgttcctg
cgcatcgcgcccgagctctacctgaagcggctggtggtgggcggcttcgagcgggtgttc
gagatcaaccgcaacttccgcaacgagggcgtgtcggtccggcacaaccccgagttcacg
atgatggagttctacgcggcctactggacccaccacgacctgatggacttcaccgagcag
atcctgcgccacgccgcgcgcaaggcggtgggcacggcgcagctcgcctacggtgggcag
gccgtcgacctggaatcgccgttcgcgcggctctcggtgcgcgactcgctggtcgcccat
gcaggattgagtgcggcggaggccgtcgactccacggtgctgcgcgcgaagctcgaagcg
catggcgagaaggctccggcgcactggtcgctcgccgaactgcagttcggcctgttcgag
gcggccgtcgaggaaaagctgtggcagccgaccttcatcgtcgactacccggtggaggtg
tcgccgctggcccgcgcctccgatgccgacccgacgatcaccgagcgcttcgagctcttc
atcaccggccgcgagttcggcaacggcttctcggagctcaacgaccccgaggaccaggcc
gcgcgcttcgcggcccaggcctcgaacaaggacgccggtgacgaggaggcgatgtacttc
gacgccgactacatccgcgcgctcgagcacggcctgccgcccaccggcggctgcggcatc
ggcatcgaccgactgatgatgctgttgaccgactcgccgaacatccgcgacgtgatcctg
ttccccgcgctgcggcgcgagggctga
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