KEGG   Methylibium sp. Pch-M: C1M51_14015
Entry
C1M51_14015       CDS       T05827                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
metp  Methylibium sp. Pch-M
Pathway
metp00740  Riboflavin metabolism
metp01100  Metabolic pathways
metp01110  Biosynthesis of secondary metabolites
metp01240  Biosynthesis of cofactors
metp02024  Quorum sensing
Module
metp_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:metp00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    C1M51_14015 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    C1M51_14015 (ribD)
Enzymes [BR:metp01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     C1M51_14015 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     C1M51_14015 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: QAZ40446
LinkDB
Position
complement(2928073..2929206)
AA seq 377 aa
MKLTPSESWALALRNANEAIGLSDPNPRVGCVITAPDGRLLASGHTQRAGSAHAEVSALR
AAQAAGHTVLGGTAWVTLEPCSHHGRTPPCCDALVEAGVAHVMVALQDPNPLVAGHGIGR
LRAAGIDVTVLATGDPVAIAARELNIGFLSRMLRQRPWVRLKIAASLDGRTALDNGLSQW
ITGDAARTDGHAYRKRAGAVLTGIGTVVDDDPRLDVRLVDTVLQPCRVVVDSKLDIALDA
RILAPPGERLVYTASALARHAAPKVRELAEQGVSVLACANADGKVDLGAMLDDLARREIN
ELHVEAGSKLSGSFVRAGLVDEFLVYLAPLMLGAGREMARFGPLTALTEGLALEFVSVER
VGADLRLIARPPGRADF
NT seq 1134 nt   +upstreamnt  +downstreamnt
gtgaagctcactccctccgaatcctgggcgctcgcgctgcgcaacgccaacgaagccatc
ggcctgtccgaccccaacccccgcgtcggctgcgtcatcaccgcccccgacggtcgcctg
ctggccagcggacacacgcagcgcgccggctcggcgcacgccgaggtgtcggcactgcgt
gcggcccaggccgcgggccacacggtgctcggcgggaccgcctgggtcacgctcgagccc
tgctcgcaccacggccgcaccccgccctgctgcgacgcgctggtcgaggccggcgtggcc
cacgtgatggtggcgctgcaggacccgaatccgctggtcgccggtcacggcatcggccgg
ctgcgggcggccggcatcgacgtgacggtgctggcgaccggcgacccggtggcgatcgcc
gcacgcgagctgaacatcggcttcctctcccgcatgctgcgccagcggccgtgggtgcgc
ctgaagatcgccgcctcgctcgacggacgcacggcgctcgacaacggcctgagccaatgg
atcaccggcgacgccgcgcgcaccgacggccatgcctaccgcaagcgggccggggcggtg
ctcaccggcatcggcaccgtggtcgacgacgacccgcggctcgacgtgcggctcgtcgac
accgtgctgcagccgtgccgggttgtcgtcgactccaagctcgacatcgcgctcgacgcc
cgcatcctcgcgccgccgggcgagcggctggtctacacggccagcgccctggcgcgccat
gcggcgccgaaggtccgcgaactggccgaacagggcgtgtcggtgctggcctgcgccaac
gccgacggcaaggtcgacctcggcgccatgctcgacgacctggcgcggcgcgagatcaac
gagctgcatgtcgaggcgggcagcaagctcagcggctccttcgtgcgggcgggcctggtc
gacgagttcctcgtctacctggcgccgctgatgctcggtgccggccgcgagatggcgcgc
ttcggtccgctcaccgcactgaccgagggcctggcgctcgagttcgtcagcgtcgagcgt
gtcggggccgatctgcgcctgatcgcccggccgccgggccgtgccgatttctga

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