Methylibium sp. Pch-M: C1M51_15070
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Entry
C1M51_15070 CDS
T05827
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
metp
Methylibium sp. Pch-M
Brite
KEGG Orthology (KO) [BR:
metp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
metp03000
]
C1M51_15070
Transcription factors [BR:
metp03000
]
Prokaryotic type
Helix-turn-helix
Other families
C1M51_15070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_lid_14
GAF
AAA_5
Mg_chelatase
HTH_7
HTH_30
HTH_23
HTH_20
AAA_2
TrmB
HTH_29
HTH_11
HVO_A0261_N
AAA_3
HTH_22
HTH_26
PAS
HTH_Tnp_ISL3
Mga
HTH_50
AAA
TsaE
Motif
Other DBs
NCBI-ProteinID:
QAZ40642
LinkDB
All DBs
Position
complement(3138813..3140861)
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AA seq
682 aa
AA seq
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MGIVSLREAGEHAHRILDTVRQGARATDDDEMARSWTRCLEQHRLHPDRPHRPSVVPAAQ
LAQRQERLADVIDCARHEMATLYQQLADTESAVVLTDTDGVILHMVSSPAFAEDVTPLGF
HVGAVWSEAEAGTNGMGTCLVAASPVAVRREDHFFTRLTSLTCSAVPVFDPQGQMTAVLD
VTSRSSLQQQHSLVLLGMTAQMIENRLLELRHPEAHLLHFHSRPEFVYTLHEGKLALEAD
GRILAGNRSALFQLGLHSVAELRERRLEDLLHTRLAELVERCRRSAFHPVVSFGAQGASR
FFVVARPPASETGAHELPVALTGPSTGTRARALVPRMEPRRDATLPPRAAPAFGDPRLSG
QLDQARRAIARDIPVLLHGETGAGKEVFARALHAASPKHAGSFVAVNCASLPESLIEAEL
FGYRAGAFTGAQRSGRRGKVLEADRGTLFLDEIGDMPLALQARLLRVLDERKVTPLGAEE
TVDVDFQLVSASHRPLAQMVEEGRFREDLYYRLCGFEVSLPALRERSDRRALIAELLALE
SGGLASLTPEAQTLLEQHPWPGNVRQLRHALRTALALADDDGLIDLPHLASLRAATVRSG
APLTLPAPAASTSVDNDAPALPPMNPIQAKEREVLLQLLEDHRWNVSNVAKALDVSRNTL
YRKLHKLHIALSHPGSGPAAAG
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcgtatcgctgcgcgaggcaggcgaacacgcacaccgcattctcgacaccgtg
cgccagggggcacgggccaccgacgacgacgagatggcgcgctcctggacgcgctgcctc
gaacagcaccgcctgcacccggatcggccgcaccgcccgtcggtggtcccggcggcccag
ctcgcgcagcgccaggagcggctggccgacgtgatcgactgcgcccgccacgagatggcc
acgctctaccagcagctggccgacaccgagtcggccgtggtgctgaccgacaccgacggc
gtgatcctgcacatggtgtcctcgccggccttcgccgaggacgtgacgccgctgggtttc
cacgtcggcgcggtgtggagcgaggccgaggccggcaccaacggcatgggcacctgcctg
gtcgcggccagcccggtggcggtgcggcgcgaggaccacttcttcacccgcctcacgtcg
ctcacctgctcggcggtgcctgtgttcgacccgcagggccagatgaccgcggtgctcgac
gtgaccagccgctcgagcctgcagcagcagcactcgctggtgctgctgggcatgactgcg
cagatgatcgagaaccgcctgctcgagctgcgccaccccgaggcccacctgctgcacttc
cacagccggcccgagttcgtctacacgctgcacgagggcaagctggcgctcgaggccgac
ggccgcatcctcgccggcaaccgcagtgcgctgttccagctcggcctgcactcggtggcc
gagctgcgcgagcgccggctggaagacctgctccacacccggctggccgagctggtggaa
cgctgccggcgcagcgccttccatccggtggtcagcttcggcgcgcagggcgcgagccgc
ttcttcgtggtggcgcgcccgccggcgtcggagaccggggcgcacgagctgccggtggcc
ctgaccggcccgagcaccggcacgcgcgcccgcgcgctggtgccgcgcatggagccgcgg
cgcgatgccaccctgcccccgcgcgccgcgccggccttcggcgacccgcggttgagcggc
cagctcgaccaggcacgccgcgcgatcgcgcgcgacatcccggtgctgctgcacggcgag
accggcgccggcaaggaggtgttcgcgcgcgcgctgcatgcggccagccccaagcacgcc
ggcagcttcgtcgcggtcaattgcgccagcctgcccgagagcctgatcgaggccgagctg
ttcggctaccgcgccggcgccttcaccggtgcgcagcgcagcggccggcgcggcaaggtg
ctggaggccgaccgcggcacgctgttcctcgacgagatcggcgacatgccgctggcgctg
caggcccgcctgctgcgcgtgctcgacgagcgcaaggtcacgccgctgggcgccgaggaa
accgtcgacgtggacttccagctggtcagcgccagccaccggccgctggcgcagatggtg
gaggaaggccgcttccgcgaggatctgtactaccggttgtgcggcttcgaggtcagcctg
cccgcgctgcgcgaacgcagcgaccggcgcgcgctgatcgccgagctgctggcgctggag
tccggcggcctggcctcgctgacgcccgaggcccagaccctgctggagcagcacccctgg
cccggcaacgtgcggcagctgcgccatgcgctgcgcaccgcgctcgcgctggccgacgac
gacggcctgatcgaccttccccacctcgcctcgctgcgcgcggccaccgtccgctccggt
gcgcccttgaccctgccggcgccggccgcgtcgacgagcgtcgacaatgacgctccagcg
ttgccgccgatgaacccgatccaggccaaggagcgcgaggtgctgctgcagctgctggaa
gaccaccgttggaacgtgagcaatgtcgccaaggcgctcgatgtcagccgcaacaccctc
taccgcaagctccacaagctgcacatcgccctctcccaccccggcagcggacccgccgct
gcagggtga
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