Methylibium sp. Pch-M: C1M51_16170
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Entry
C1M51_16170 CDS
T05827
Name
(GenBank) TetR family transcriptional regulator
KO
K16137
TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
Organism
metp
Methylibium sp. Pch-M
Brite
KEGG Orthology (KO) [BR:
metp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
metp03000
]
C1M51_16170
Transcription factors [BR:
metp03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
C1M51_16170
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Paralog
GFIT
Motif
Pfam:
TetR_C_13
TetR_N
TetR_C_13_2
TetR_C_6
TetR_C_11
TetR_C_24
Motif
Other DBs
NCBI-ProteinID:
QAZ40836
LinkDB
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Position
complement(3378233..3378898)
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AA seq
221 aa
AA seq
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MPSSSLAPDRARPAAVRRSHAERGDARDGTRARLVRAGIEAVLERGWAASGVDAVLRSAG
VPKGSFYHYFPSKDDFGYAVLEGYQAFFLKRLERCFGGEAPAARSLDAQFADFLAESLDG
MARHGWQRGCLVGALGQELGGLHEGFRRRLLASLDEWGEVLARALAAAQARGEVRRGLDP
ALAARGFWAAWEGAVLRARLARDGAPLEAAIADFRRLVAPD
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgccttcctcttcccttgcgccagatcgcgcgcgtcccgccgccgtccggcgcagccat
gccgaacgtggcgacgctcgtgatggcacgcgggcccggttggtgcgcgccggcatcgag
gccgtgctcgaacgcggctgggccgccagcggcgtggacgccgtgctgcgttcggccggg
gtgccgaaaggctcgttctatcactactttcccagcaaggacgacttcggctacgcggtg
ctggagggctaccaggcgttcttcctgaagcggctcgagcgctgcttcggcggcgaagcg
ccggcggcgcgcagcctcgatgcgcagttcgccgacttcctggccgagtcgctcgacggc
atggcccggcacggctggcagcgcggttgcctggtcggcgcgctgggccaggaactgggc
gggctgcacgagggcttccggcggcgtctgctggcctcgctcgacgaatggggcgaggtc
ctggcgcgtgcgctggccgcggcgcaagcgcgcggtgaggtgcgccgcgggctcgatccc
gcgctggccgcgcgcggcttctgggcggcctgggaaggcgccgtgctgcgcgcccgcctg
gcgcgcgacggcgcgccgctggaggccgccatcgccgacttccgacggctcgtcgcaccc
gactga
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