Methylibium sp. Pch-M: C1M51_16795
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Entry
C1M51_16795 CDS
T05827
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
metp
Methylibium sp. Pch-M
Brite
KEGG Orthology (KO) [BR:
metp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
metp03009
]
C1M51_16795
Enzymes [BR:
metp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
C1M51_16795
Ribosome biogenesis [BR:
metp03009
]
Prokaryotic type
rRNA helicases
C1M51_16795
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QAZ40947
UniProt:
A0A4P6GY25
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All DBs
Position
complement(3515149..3516570)
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AA seq
473 aa
AA seq
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MSPSPSKDAPSGAPPLPFGQLPLAPAVLANLEQLGYHSMTPVQAATLPIALAGRDLIAQA
KTGSGKTAAFALALLARLDPRRLDVQSLVLCPTRELADQVTQELRRLARSQENTKILTLC
GGATMRPQLASLQHGAHIVVGTPGRIIDHLERGSLALASLNTLVLDEADRMLDMGFFDDI
AAVARHCPPQRQTLLFSATYPEGIARLSAQFLRQPEHVRLESQHDAGKIRQRFYEVKEEQ
RLHAVGLLLDHFRPASTLAFCNTKQQCRDLVAVLSAQGVQALALHGDLEQRDRDQVLLQF
ANRSCSVLVATDVAARGLDVEQLEAVVNVDISPDPEVHIHRIGRTGRADQAGWALSLATL
DEMPSVAKIDQLQDRESDWHPLSELTPSGGGPLVPPMVTLQILGGRKEKIRPGDVLGALT
GDAGLAAAQIGKINVTEFSTYVAVERSIAKEALRKLDGGRVKGKKIKARSLQA
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtccccgtccccctcgaaagacgccccgtccggcgcacctcccctgcccttcggccag
ctgccgctggcgcccgccgtgctggccaatctggagcagctcggctaccacagcatgacg
ccggtccaggccgccacactgccgatcgcactggcgggccgcgacctgatcgcccaggcc
aagaccggcagcggcaagacggccgccttcgccttggccctgctggcgcggctcgatccg
cgccgcctcgacgtgcagagtctggtactgtgcccgacgcgcgagctcgccgaccaggtg
actcaggaactgcgccgcctggctcgcagtcaagagaacaccaagatcctcacgctgtgc
ggcggcgccacgatgcgcccgcaactggccagcctgcagcacggcgcgcacatcgtcgtc
ggcacgccgggtcgcatcatcgaccacctggagcgcggcagtctcgcgctcgcctcgctg
aacacgctggtgctcgacgaagccgaccgcatgctcgacatgggcttcttcgacgacatc
gccgcggtcgcccgccattgcccaccgcagcgccagacgctgctgttctcggccacctac
cccgaaggcatcgcccggctgagcgcgcagttcctgcgccagcccgagcatgtccggctc
gaatcccagcacgacgcaggcaagatccgccagcgtttctacgaggtgaaggaagagcag
cgcctgcacgcggtcggactgctgctcgaccacttccgtcccgccagcacgctggcgttc
tgcaacaccaaacagcagtgccgcgatctggtggccgtgctgagcgcgcaaggcgtgcag
gcgctggcgctgcacggcgatctggaacagcgcgaccgcgatcaggtgctgctgcagttc
gcgaaccgcagctgttcggtgctggtggcgaccgacgtcgccgcgcgcggcctcgacgtc
gagcaactcgaagcggtcgtcaacgtcgacatctcgcccgacccggaagtgcacatccac
cgcatcggccgtaccggccgcgccgatcaggccgggtgggcgctcagcctggccacgctc
gacgaaatgcccagcgtggcgaagatcgatcagttgcaggaccgggaatcggactggcac
ccgctgagcgaactcacgccgtccggcggcgggcccctggtgcctccgatggtcacgctg
cagattctgggcggtcgcaaggagaagatccgtcccggcgacgtgctgggtgcgctgacc
ggcgacgccggcctggccgctgcccagatcggcaagatcaacgtcaccgagttctcgacc
tacgtggccgtcgagcgcagcatcgccaaggaggcgctgcgcaagctcgacggcggccgg
gtcaagggcaagaagatcaaggcacgcagccttcaggcatga
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