Methylibium sp. Pch-M: C1M51_16885
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Entry
C1M51_16885 CDS
T05827
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
metp
Methylibium sp. Pch-M
Brite
KEGG Orthology (KO) [BR:
metp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
metp03016
]
C1M51_16885
Enzymes [BR:
metp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
C1M51_16885
Transfer RNA biogenesis [BR:
metp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C1M51_16885
Prokaryotic type
C1M51_16885
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QAZ40963
LinkDB
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Position
3533888..3534670
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AA seq
260 aa
AA seq
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MRLALGLSYRGGAYRGWQSQPDGLTVQDRVEEALARFADRPVRTVCAGRTDAGVHALNQV
VHLDTEIERKPFSWVRGTNRYLPPDIAVQWCRPVDAAFHARNSARGRRYAYLLLESPVRP
AIESGAVGWVFRPLDATPVREAAAHLIGEHDFSAFRSAECQAASPVKTLRRIEIVRRGAY
WRFEFEASAFLHHMVRNLMGCLLAVGQGTRTPQWLAEVLAAGDRSLAAPTFAPDGLYFLG
PHYDANLDLPERTPAFDWLP
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgcgattggccctgggcctgagctatcgcggcggcgcctaccggggctggcagagccaa
cccgacggactcacggtgcaggaccgggtcgaggaggcactggcccgcttcgccgatcga
ccggtgcgcactgtgtgcgccgggcgcaccgacgcgggcgtgcatgcgctcaaccaggtg
gtgcacctcgacaccgagatcgagcgcaagcccttctcctgggtgcgcggcaccaaccgc
tacctgcctcctgatatcgccgtgcaatggtgccggccagtcgatgccgccttccacgcg
cgcaacagcgcgcgtggaaggcgctatgcctacctgctgctggagtcgcccgtgcggccg
gccatcgagtccggtgcggtcggctgggtgttccggccactcgatgcgacgcctgtgcgc
gaggcggcggcccacctgatcggcgaacacgatttcagcgccttccgctcagccgagtgc
caagcggccagcccggtgaagaccctgaggcgcatcgagatcgttcgtcgcggcgcctac
tggcgcttcgagttcgaggccagcgccttcctgcaccacatggtccgcaatctgatgggc
tgcctgctggccgtggggcagggcacgcgcacgccgcagtggctggccgaggtgctggcc
gcgggcgatcgcagcttggctgcgcccacctttgctccggatggcttgtatttcctcggt
ccgcactacgatgcgaacctcgacctgcccgaacgcacgcccgcgttcgactggctgccc
tga
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