KEGG   Methylibium sp. Pch-M: C1M51_17555
Entry
C1M51_17555       CDS       T05827                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
metp  Methylibium sp. Pch-M
Pathway
metp00010  Glycolysis / Gluconeogenesis
metp00020  Citrate cycle (TCA cycle)
metp00260  Glycine, serine and threonine metabolism
metp00280  Valine, leucine and isoleucine degradation
metp00310  Lysine degradation
metp00380  Tryptophan metabolism
metp00620  Pyruvate metabolism
metp00630  Glyoxylate and dicarboxylate metabolism
metp00640  Propanoate metabolism
metp00670  One carbon pool by folate
metp00785  Lipoic acid metabolism
metp01100  Metabolic pathways
metp01110  Biosynthesis of secondary metabolites
metp01120  Microbial metabolism in diverse environments
metp01200  Carbon metabolism
metp01210  2-Oxocarboxylic acid metabolism
metp01240  Biosynthesis of cofactors
Module
metp_M00009  Citrate cycle (TCA cycle, Krebs cycle)
metp_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
metp_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
metp_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:metp00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    C1M51_17555 (lpdA)
   00020 Citrate cycle (TCA cycle)
    C1M51_17555 (lpdA)
   00620 Pyruvate metabolism
    C1M51_17555 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    C1M51_17555 (lpdA)
   00640 Propanoate metabolism
    C1M51_17555 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    C1M51_17555 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    C1M51_17555 (lpdA)
   00310 Lysine degradation
    C1M51_17555 (lpdA)
   00380 Tryptophan metabolism
    C1M51_17555 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    C1M51_17555 (lpdA)
   00670 One carbon pool by folate
    C1M51_17555 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:metp04147]
    C1M51_17555 (lpdA)
Enzymes [BR:metp01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     C1M51_17555 (lpdA)
Exosome [BR:metp04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   C1M51_17555 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox AlaDh_PNT_C Pyr_redox_3 FAD_oxidored FAD_binding_2 GIDA NAD_binding_8 HI0933_like FAD_binding_3 3HCDH_N NAD_binding_2 DAO
Other DBs
NCBI-ProteinID: QAZ41081
UniProt: A0A4P6GXV6
LinkDB
Position
3678470..3679897
AA seq 475 aa
MSKTFDVVVIGGGPGGYIAAIRAAQLGFNTACIDEWKNDKGGPAPGGTCTNVGCIPSKAL
LQSSEHFEHAGHAFADHGIGLKDLSIDVAKMLGRKDTVVKQNNDGILYLFKKNKVAFFHG
RGSFVKAGDGGYEIKVSGATEDTLIGKDIIIATGSSARALPGAPFDEESILSNDGALRIP
SVPAKLGVIGSGVIGLEMGSVWRRLGAEVTVLEALPTFLGAVDEQIAKEAQKAFMRQRLK
IELGVKISEVKKDKKGVSVSYTSAKGDAKTLEVDKLIVSIGRVPNTTGLNAEAVGLKLDE
RGAIVVDDDCRTNLPKVWAIGDVVRGPMLAHKAEEEGVAVAERIAGQHGHVNFNTIPWVI
YTSPEIAWVGQTEQQLKAAGRAYKAGTFPFLANGRARALGDTTGMVKFLADAATDEILGV
HIVGPMASELIAEAVVAMEFKASAEDIARICHAHPSLSEATKEAALAVDKRTLNF
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgagcaagactttcgatgtcgtcgtgatcggcggcggcccgggcggctacatcgcggcc
atccgtgcggcgcagctgggtttcaacaccgcctgcatcgacgagtggaagaacgacaag
ggcggtccggcacccggcggtacctgcacgaacgtcggctgcatcccgtcgaaggcgctg
ctgcagtcgagcgagcacttcgaacacgccggccatgcgttcgccgaccacggcatcgga
ctgaaagacctgagcatcgacgtcgcgaagatgctggggcgcaaggacaccgtcgtgaag
cagaacaacgacggcatcctctatctgttcaagaagaacaaggtcgccttcttccacggc
cgcggctcgttcgtgaaggccggtgacggtggctacgagatcaaggtcagcggcgccacc
gaggacacgctgatcggcaaggacatcatcatcgccaccggttcgagtgcgcgcgcgctg
ccgggtgcaccgttcgacgaggagagcatcctcagcaacgacggagcgctgcgcatcccg
tcggtgccggcgaagctgggcgtgatcggctcgggcgtgatcggcctcgagatgggctcg
gtgtggcgccgcctgggcgccgaggtgacggtgctggaagcgctgccgaccttcctgggc
gcggtcgacgaacagatcgccaaggaagcccagaaggccttcatgaggcagcgcctgaag
atcgagctgggcgtgaagatcagcgaagtcaagaaggacaagaagggcgtcagcgtcagt
tacaccagcgccaagggcgatgccaagacgttggaggtcgacaagctgatcgtgtcgatc
ggccgcgtgcccaacaccaccggcctgaacgccgaagcggtggggctgaagctcgacgag
cgcggcgcgatcgtggtcgacgacgactgccgcaccaacttgccgaaggtgtgggccatc
ggcgacgtggtgcgcggcccgatgcttgcccacaaggcggaagaagagggtgtggcggtc
gcggagcgcattgccggccagcatggacacgtcaacttcaacaccatcccctgggtcatt
tacaccagcccggagatcgcctgggtcggccagaccgagcagcagctcaaggcggccggc
cgcgcctacaaggccggaaccttcccgttcctggccaatggccgtgcgcgtgcgctcggc
gacacgaccggcatggtgaagttcctggcggacgctgcgaccgacgagatcctcggcgtg
cacatcgtcgggccgatggccagcgaactgatcgccgaggcggtggtggcgatggagttc
aaggccagtgccgaggacattgcccgcatctgccacgcgcatccgtcgctgtcggaagcg
accaaggaggccgccctggccgtggacaagcgcacgctgaacttctga

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