Methylibium sp. Pch-M: C1M51_18200
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Entry
C1M51_18200 CDS
T05827
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
metp
Methylibium sp. Pch-M
Pathway
metp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
metp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
C1M51_18200
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
metp01007
]
C1M51_18200
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
metp03016
]
C1M51_18200
Enzymes [BR:
metp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
C1M51_18200
Amino acid related enzymes [BR:
metp01007
]
Aminoacyl-tRNA synthetase
Class II (U)
C1M51_18200
Transfer RNA biogenesis [BR:
metp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
C1M51_18200
Prokaryotic type
C1M51_18200
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
tRNA_bind
FDX-ACB
B5
Motif
Other DBs
NCBI-ProteinID:
QAZ41197
UniProt:
A0A4P6GYQ2
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All DBs
Position
3810781..3813201
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AA seq
806 aa
AA seq
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MQFPESWLREFCNPPLSTAALAETLTMAGLEVEELRPVAPPFDKVVVAEVIAVEKHPNAD
RLHVCRVDVGAEAPLSIVCGAPNVRAGIKVPCALVGAELPPAEAGGAPFQIKLGKLRGVE
SQGMLCSARELKLSEDHGGLLILAEDAPVGASIRSHLQLDDTLFTLKLTPNLAHCLSVYG
IAREVSALTGAPLAQPVFAPVPPVHGATLPIRVTAPDLCGRFSGRIVRGVNPRAATPPWM
VERLARCGQRSVSALVDISNYVMFEFGRPSHIFDLDKIHGGLEVRWGRPGESLELLNGST
IEVDAAVGVIADDRQVESLAGIMGGQATAVTDDTRNVYVEAAFWWPQSVAGRSRRYNFST
DAGHRFERGVDPAQTVEHIERITQLILEVCGGEAGPMDDQTLGLPERTPVAMRVDRASRV
IGMPVSQAQCVGVFRRLGLVCREEDGRIVVTPPSWRFDLQIEEDLIEEIIRVLGYSMLPD
TPPLAPVTPRVMSESRRGLHTLRHAMAGLDYQETVNFSFVEARWERDFAGNEAPIRLLNP
IAAPLAVMRSSLIGSLINVLRFNLARKAARVRVFEIGRVFLRNPSAVDSDVGVAGVDQPL
RLGGLAYGGCDEPQWGSAERGVDFFDVKGDVEALLVPRRPRFVAAEHPALHPGRSARIEL
DGRAVGWIGELHPRWRQAYELPQAPVVFELDAQALSEGGVPVYAAIPKQQAAVRDIALIV
GDQVAHDALMQSIAAAPSGGVVRSARLFDVYRPKNPSAEVAAGERSLAIRLELLDEQGTL
TDERIDAAVRSVLDTLSVQLGARLRA
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttcctgaatcctggttgcgcgagttctgcaacccgccgctatcgaccgccgcg
ctggccgagacgctgaccatggccggcctcgaggtcgaggaactgcgcccggtcgcgccg
ccgttcgacaaggtggtggtggccgaagtgatcgccgtcgagaagcatcccaatgccgac
cggctccatgtctgccgggtcgatgtcggcgccgaggcgccgctgtccatcgtctgcggc
gcgccgaacgtgcgagccgggatcaaggtgccgtgcgcgttggtgggcgcggagctgccg
ccggccgaggcgggcggtgcgccgttccagatcaagctcggcaagctgcggggcgtcgag
agccagggcatgctgtgctcggcgcgcgagctcaagctgtcggaagaccatggcggcttg
ttgatcctcgccgaggatgctccggtgggcgcgagcatccgcagccacctccagctcgac
gacacgctgttcacgctgaagctcacgcccaatctggcccactgcctgagcgtctatggc
atcgcccgcgaggtgtcggcgctgacgggcgcgccgctcgcgcagccggtcttcgcgccg
gtgccgccggtgcacggcgccacgctgccgattcgcgtcacggcacccgacctgtgcggc
cgcttctcggggcgcatcgtccgcggcgtgaacccgcgggcggcgacgccgccctggatg
gtggagcgcctcgcgcgctgcggccagcgctcggtgagtgcactggtcgacatctcgaac
tacgtgatgttcgagttcggccgtccctcgcacatcttcgatctcgacaagatccatggc
gggcttgaagtgcgctggggtcggcccggtgagtccctggaactgctgaacggcagcacc
atcgaggtcgacgctgccgtgggcgtgatcgccgacgatcggcaggtcgaatcgctggcc
gggatcatgggcggccaggccaccgcggtgaccgacgacacccgcaacgtgtacgtcgag
gccgcattctggtggccgcagtcggtcgccgggcgctcgcgccgctacaacttcagcacc
gacgccgggcaccgcttcgagcgcggcgtcgatccggcgcagacggtcgagcacatcgag
cgcatcacgcaactgatcctcgaggtctgcggcggcgaagccggcccgatggacgaccaa
acgctcgggctgcccgagcgcacgccggtcgcgatgcgcgtcgatcgcgccagccgcgtg
atcggcatgccggtctcgcaggcccagtgcgtcggcgtgttccggcggctgggattggtg
tgccgcgaggaggacggacgcatcgtcgtcacgccaccgagctggcgtttcgatctgcag
atcgaggaagacctgatcgaggagatcatccgtgtcctcggctactcgatgctgcctgac
acgccgccgctggcccccgtgacgccacgcgtgatgtcggagtcgcgtcgtggactgcac
acgctacggcacgcgatggccggcctggattaccaggaaaccgtgaatttcagcttcgtc
gaggcacgctgggagcgcgactttgccggcaacgaggccccgatccgattgctcaatccg
atcgctgcgccactggccgtgatgcgatccagcctgatcggcagcctgatcaacgtgttg
cgcttcaacctcgcgcgcaaggcggcgcgggtgcgcgtgttcgagatcggccgcgtgttc
ctgcgcaatccctccgccgtcgacagcgacgtcggcgtggccggggtcgaccagccgctg
cgcctggggggcctggcctatgggggctgcgatgaaccgcaatggggcagcgccgaacgc
ggcgtcgacttcttcgacgtgaagggcgacgtggaggcgctgctggtgccgcgtcggccg
cgcttcgtcgctgcggagcacccggcgctgcatccggggcgcagtgcccggatcgagctc
gacggccgagccgtcggctggatcggcgaactgcacccgcgctggcgacaggcctacgaa
ctgccgcaggcgccggtcgtgttcgaactcgacgcgcaggcgctgtcggagggcggcgtg
ccggtctatgccgccatcccgaagcagcaggcggcggttcgggacatcgccctgatcgtc
ggcgatcaagtcgcccacgatgcgctgatgcaatcgatcgccgcagcgcccagcggcggc
gtcgtacgcagcgcacgcctgttcgatgtctaccgccccaagaacccaagtgccgaggtg
gccgccggtgagcgcagcctggccatacggcttgaactgttggacgagcagggcacgctg
accgacgagcgcatcgacgccgcagttcgctccgtgctggacacactttctgtgcaactg
ggcgcccgcctgcgtgcctga
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