Methylorubrum sp. GM97: MSPGM_13920
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Entry
MSPGM_13920 CDS
T10720
Symbol
papS
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
metq Methylorubrum sp. GM97
Pathway
metq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
metq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MSPGM_13920 (papS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
metq03019
]
MSPGM_13920 (papS)
Enzymes [BR:
metq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
MSPGM_13920 (papS)
Messenger RNA biogenesis [BR:
metq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MSPGM_13920 (papS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Cox20
Motif
Other DBs
NCBI-ProteinID:
BDL38802
LinkDB
All DBs
Position
1533217..1534491
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AA seq
424 aa
AA seq
DB search
MTTDPLPSSVAPPLVADGPARLLARAGVQACLAALDAPGEETRLVGGCVRDALLGTIVAD
IDLATTLRPEAVMACARTAGIKAVGTGIEHGTVTLVVGGEPHEVTTLREDVETDGRHAVV
RFGRDFARDAERRDFTINALSLDAEGRLHDTTGGVADLAAGRVRFIGDAATRLREDALRL
LRFFRFHARYGSGAPDAEGLAASIAARDSLDRLSRERVRAEFLKLLLAPRAVDAVAILSE
TGLLPRILGGVGELGRLSRCATTELGVDATARFAALAVRTSEDADRLQASLRLSRAEHAR
LTGYAIALAALHDRPVIEADAVPALVATYGAGPLRELLIALDGEPRPRVTPAARAMLDRM
EAAGTRPVLPVTGADLVARGVAPGRAVGAGLRAARDLWLASGCPDDAEARERLIARALEA
AAAP
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgacccgctgccctcatccgttgccccgccgctggtcgcggacggcccggcc
cgcctcctggcgcgggcgggcgtgcaagcctgcctcgcggcgctcgatgcgccgggcgag
gaaacgcgtctcgtcggtggctgcgtgcgcgacgcgctgctgggcaccatcgtcgccgac
atcgaccttgccaccacgctgcggcccgaggccgtgatggcctgcgcccgcaccgccggg
atcaaggcggtgggcacggggatcgagcacgggaccgtcaccctcgtcgtcggcggcgag
ccgcacgaggtgacgaccctgcgcgaggacgtggagaccgacgggcgacacgcggtggtg
cgtttcggccgcgacttcgctcgcgatgccgagcggcgcgacttcaccatcaacgccctc
tcgctcgacgcggagggacgcctgcacgacacgaccgggggtgtcgccgacctcgccgcc
ggccgggtgcgcttcatcggcgacgcggcgacccgcctgcgcgaagatgccttgcggttg
ctgcgtttcttccgcttccacgcccgctacgggagcggcgcaccggatgcggagggactc
gccgcctccatcgccgcccgcgacagcctcgaccggctctcgcgggagcgggtgcgcgcc
gagttcctgaagctgctgctggcgccccgcgccgtcgatgcggtggcgatcctgagcgag
accggcctactgccgcgcatcctcggcggtgtcggcgaactgggccggctctcccgctgc
gcgacgaccgagctgggcgtcgacgccacggcgcgcttcgccgcgctcgcggtgcggacg
agcgaggacgcggaccggctgcaggcgagccttcgtctgtcgcgggccgagcacgcgcgc
ctcaccggctacgccatcgccctcgcggccctgcacgaccggccggtgatcgaggccgac
gcggtgccggctctcgtcgccacctatggcgccgggcccctgcgtgagttgctgatcgcc
ctcgacggcgagccgcgcccgcgcgtgacaccggcggcgcgtgccatgctcgaccggatg
gaagccgccggcacgcgccccgtcctcccggtcacaggcgccgatctcgtggcgcgcggc
gtcgcaccgggtcgggcggtcggtgcagggttgcgggcggcccgggacctctggctcgcc
agcggatgcccggacgacgcggaggcacgcgagcggctgatcgcgcgggcgctggaagcc
gcggcagcgccatag
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