Methylorubrum sp. GM97: MSPGM_15170
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Entry
MSPGM_15170 CDS
T10720
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
metq Methylorubrum sp. GM97
Pathway
metq03030
DNA replication
metq03430
Mismatch repair
metq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
metq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSPGM_15170 (holA)
03430 Mismatch repair
MSPGM_15170 (holA)
03440 Homologous recombination
MSPGM_15170 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
metq03032
]
MSPGM_15170 (holA)
03400 DNA repair and recombination proteins [BR:
metq03400
]
MSPGM_15170 (holA)
Enzymes [BR:
metq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MSPGM_15170 (holA)
DNA replication proteins [BR:
metq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MSPGM_15170 (holA)
DNA repair and recombination proteins [BR:
metq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MSPGM_15170 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
BDL38927
LinkDB
All DBs
Position
complement(1661799..1662830)
Genome browser
AA seq
343 aa
AA seq
DB search
MTAVKAGDVEGLVRRGPDPRIAVVLVYGPDVGLVADRAMRLVRGMVADPDDPFALIRIDG
DTLASDPGRLVDEAGTVGLFGGSRTIWVRSGSRNYAPAVDAVLKAPTEGARIVVEAGDLA
RSAPLRTLCEGSPKALALPCYPDDERTLADLIERTLQEDGLRIDRDARDLLTGSLGSDRR
ASLSEIGKLALYARGQGSVGVDDVEAIVSDVGASVLNALIDAAFAGRASEAEREYRRFRH
EGMDPSAMLGAGLRHALTLLSLRLDNPRGSANQIVANWRGLHFRRKALAETQLARWSAPG
LQQAVAWLQDAVLACRRSEPDLAHAQAQGVFLRIAIEAARRRA
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgacggcggtcaaagccggcgatgtcgaggggctggtccggcgcggccccgatccgcgc
attgcggtcgttctggtctacgggccggatgtcggcctcgtggccgaccgggcgatgcgt
ctggtccgggggatggtcgccgaccccgacgacccctttgcgctgatcaggatcgacggc
gacaccctcgcctccgatccgggccgcttggtcgacgaggccggcaccgtcggcctgttc
ggcggcagccgcacgatctgggtccgctccggcagccgcaactacgcgccggccgtcgat
gccgtgctgaaggcgcccaccgaaggcgcccgcatcgtcgtggaggcgggcgacctcgcc
cgctccgcccccctgcgcacgctctgcgagggatcgcccaaggcgctcgccctgccctgc
taccccgacgacgagcgcacgctcgccgatctgatcgagcgcacgctgcaggaggacggg
ctgcgcatcgaccgcgacgcccgcgacctgctgacgggcagcctcggcagcgaccgccgc
gccagcctgtccgagatcggtaagcttgccctctacgcccgcggccagggcagcgtcggc
gtggacgacgtcgaggcgatcgtcagcgatgtcggagcgagcgtcctcaacgctctgatc
gacgcggccttcgccggccgtgccagcgaggccgagcgcgagtatcgccgcttccgccat
gaagggatggacccctcggcgatgctcggcgccgggctgcgccacgccctgacgctgctc
tccctacgcctcgacaatccgcgcggcagcgcgaaccagatcgtcgccaattggcgcggc
ctgcatttccgccgcaaggcactggccgaaacccaactcgcccgctggtcggcaccgggg
ctgcaacaggccgtggcgtggctccaggacgccgtgctcgcctgccgccgctcggagccg
gacctcgcccacgctcaggcgcagggcgtgttcctgcggatcgccatcgaggccgcgcgg
cggcgcgcctga
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