Methylorubrum sp. GM97: MSPGM_18300
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Entry
MSPGM_18300 CDS
T10720
Symbol
rnhB
Name
(GenBank) ribonuclease HII
KO
K03470
ribonuclease HII [EC:
3.1.26.4
]
Organism
metq Methylorubrum sp. GM97
Pathway
metq03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
metq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSPGM_18300 (rnhB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
metq03032
]
MSPGM_18300 (rnhB)
Enzymes [BR:
metq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
MSPGM_18300 (rnhB)
DNA replication proteins [BR:
metq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
MSPGM_18300 (rnhB)
Elongation factors (archaeal)
MSPGM_18300 (rnhB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_HII
Motif
Other DBs
NCBI-ProteinID:
BDL39240
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All DBs
Position
complement(1996389..1997039)
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AA seq
216 aa
AA seq
DB search
MAPRPKSVKAPRPFDPALAATYPAVIGCDEVGRGALCGPVMVAAVWFDPVAFPPEILARL
DDSKRLDRAAREALTPLIRAHARVSLAAGSRALVDRVNVRGATLDAMRRAVLGLGLDATV
LVDGRDPIPGLTQGCRAVIGGDRLVPQIAAASIVAKTFRDEIMRRLAPRHPAYAWERNAG
YGTAAHLAGLTAQGRSPHHRLSFTGRFEAARGISDA
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggcccctcgaccgaaatccgtcaaagccccgcgcccgttcgatcctgcgcttgctgcc
acctatccggcggtgatcggctgcgacgaggtcgggcgcggtgccctgtgcggtccggtg
atggtggcggccgtgtggttcgaccccgtcgccttcccgccggagatcctggcccggctc
gacgacagcaagcgcctcgaccgtgccgcgcgcgaggcgctgaccccgctgatccgggcg
catgcgcgggtttcgctcgcggcaggctcgcgggcgctggtggaccgggtgaacgtgcgc
ggggcgaccctcgacgccatgcgccgggcggtcctgggccttggcctcgacgcgaccgtg
ctggtggacgggcgcgatccgattcccggcctgacgcagggctgccgcgcggtgatcggc
ggcgaccgcctcgtgccgcagatcgccgccgcctccattgtcgccaagacgtttcgcgat
gagatcatgcgtcggctcgccccgcgccacccggcctatgcctgggagcgcaatgccggc
tacggcaccgccgcccacctcgccggcctcaccgcgcaaggccgcagcccgcaccacagg
ctcagcttcacgggacggttcgaggccgcgcgcggcatctcggacgcgtga
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