Methylorubrum sp. GM97: MSPGM_18990
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Entry
MSPGM_18990 CDS
T10720
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
metq Methylorubrum sp. GM97
Pathway
metq03030
DNA replication
metq03430
Mismatch repair
metq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
metq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSPGM_18990
03430 Mismatch repair
MSPGM_18990
03440 Homologous recombination
MSPGM_18990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
metq03032
]
MSPGM_18990
03400 DNA repair and recombination proteins [BR:
metq03400
]
MSPGM_18990
Enzymes [BR:
metq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MSPGM_18990
DNA replication proteins [BR:
metq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MSPGM_18990
DNA repair and recombination proteins [BR:
metq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MSPGM_18990
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_18
AAA_14
AAA_30
RCF1-5-like_lid
AAA_16
TsaE
AAA_19
AAA_5
AAA_assoc_2
SRP54
nSTAND3
Rad17
Motif
Other DBs
NCBI-ProteinID:
BDL39309
LinkDB
All DBs
Position
complement(2067201..2069081)
Genome browser
AA seq
626 aa
AA seq
DB search
MDETHGTLTDEPGLPGMPTPAPVPATTPYRVLARKYRPQTFDDLIGQGAMVRTLGNAFAA
NRIPQAWMLTGVRGVGKTTTARILARGLNYLRTGQPDTGPTVSMPELGQHCQAIMESRHM
DVLEMDAASHTGIDDVRGIIDGIRYSPVSARYKVYIVDEVHMLSEKAFNAFLKTLEEPPP
HAKFVFATTEIRKVPVTILSRCQRFDLRRVEADVLAAHLKKICAAEGVEAEDEALAAVTR
AAEGSVRDALSLLDQAIAHGAGAVSAAGVRDMLGLADRSRIVDLFEAVMRGDVPAAFAEI
RAQYDAGADPAVVLSDLAGFTHLVTRLKLVPGAEADPTLSEAERVRGVAFAGRLPVRALS
RAWQILLKALPEVQAAPRPLAAAEMAIVRLAYAADLPTPDEALRQLRADIASSEGNGAAR
PSLGRDGGSPMASHGSAALQMAPPAPQPSPRPTLAAVPSPVSAAAPQPASRPAPVAPAGP
RLGRFEDVVAQAEAARDIALKVALERDVHLVRFEEGRIEFRLAPGGRQSLPTDLARALDA
WTGRRWLVALSKEQGAPTLAENTRAAEETRHQNAAAHPLVREVLSRFPGAQIVDVRDKAP
ETDSADAAANGAGPAAPPPEETDDDA
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggacgagacgcacggcacgctcaccgacgagccgggcctgcccggcatgcccaccccc
gcgcccgtgccggccacgacgccttaccgggtgttggcgcgaaaatatcgccctcagacc
ttcgatgacctgatcggccagggcgccatggtgcgcacgctgggcaacgcctttgcggcc
aaccgcatcccgcaggcctggatgctcacgggcgtgcgcggcgtcggcaagacgaccacc
gcccgcatcctcgcccgcggcctcaactacctgcgcaccggccagccggataccggcccc
accgtgtcgatgccggagctcggccagcactgccaggcgatcatggaatcccggcacatg
gatgtgctggagatggacgcggcctcgcataccggcatcgacgacgtgcgcggcatcatc
gacggcatccgctactcgccggtctcggcccgctacaaggtctacatcgtcgacgaggtc
cacatgctctcggagaaggcattcaacgccttcctgaagacgctggaggagccgccgccc
cacgccaagttcgtgttcgcgaccaccgagatccgcaaggttccggtgacgatcctgtcg
cgctgccaacgcttcgatctacgccgggtcgaggccgacgtgctcgccgcccacctgaag
aagatctgcgccgcggaaggggtggaggccgaggacgaggcgctcgccgccgtcacccgc
gccgccgagggctcggtgcgcgacgcgctctcgctgctcgatcaggccatcgcccatggg
gcgggcgcggtctcggctgcgggtgtgcgcgacatgctcggcctcgccgaccgttcacgc
atcgtcgatctgttcgaggccgtgatgcgcggcgacgtgccggccgccttcgccgagatc
cgcgcccagtacgacgcgggcgccgacccggcggtcgtgctctcggacctcgccggcttc
acccatctcgtcacccgcctcaagctcgtgccgggggccgaggccgaccccaccttaagc
gaggcggagcgcgtgcgcggcgtcgcgtttgccgggcgcctgccggtgcgggccctgtcg
cgggcgtggcagatcctgctgaaggcgctgcccgaagtgcaggccgcgccccgcccgctc
gccgccgccgagatggcgatcgtgcggctcgcctatgccgccgacctgccgacgcccgac
gaggccctgcgccagcttcgggccgacatcgcctcgtccgagggcaacggcgccgctcgc
ccgagcctcggacgcgacggcggctcccccatggcctcgcacggctcggccgcactgcag
atggcgccgcccgccccgcagccctcgcctcggccgaccctggccgcggtgccctccccc
gtctccgccgcggcgccgcaacccgcatcgcgcccggctccggtggccccggccggtccg
cggctcgggcgcttcgaggacgtggtcgcccaggccgaggccgcccgcgacatcgccctc
aaggtggcgctggagcgtgacgtgcatctggtgcgcttcgaggaggggcggatcgagttc
cgactcgcccccggcggccggcagagcctcccgaccgatctcgcccgcgccctcgatgcc
tggaccggacggcgctggctggtggccctctccaaggagcagggtgcgccgacgctcgcg
gaaaacacgcgggcggccgaggaaacgcgccaccagaacgccgccgcccacccgctggtg
cgggaagttctgtcgcgcttccccggcgcacagatcgtcgatgtgcgagacaaggcgccg
gagaccgacagcgccgatgccgcggcgaacggcgccgggccggcagcccctccgcccgaa
gagaccgacgacgacgcctga
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