Methylorubrum sp. GM97: MSPGM_20250
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Entry
MSPGM_20250 CDS
T10720
Symbol
speF
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
metq Methylorubrum sp. GM97
Pathway
metq00330
Arginine and proline metabolism
metq00480
Glutathione metabolism
metq01100
Metabolic pathways
metq01110
Biosynthesis of secondary metabolites
metq04148
Efferocytosis
Module
metq_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
metq00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
MSPGM_20250 (speF)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
MSPGM_20250 (speF)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
MSPGM_20250 (speF)
Enzymes [BR:
metq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
MSPGM_20250 (speF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
BDL39435
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All DBs
Position
complement(2211816..2212982)
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AA seq
388 aa
AA seq
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MTDRIRDYLRARRDLGQDEGPVMVLDLDVVRDNYTAFARALPDTRVFYAVKANPAAEVLR
LLAEMGSCFDTASVAEIEMALAAGATADRVSFGNTIKKERDVVRALKLGIRLFAVDCQAE
VEKIVRASEAAGIAAGEVQVFCRILCDGAGADWPLSRKFGCEPEMAVNVLEHAHRHGLNA
YGVSFHVGSQQANTEAWDGALASASEIFRECALRGIGLSMVNLGGGFPTKYLKQVPGVET
YGDAIFRALTKHFGNRIPETIIEPGRGMVGNAGLIEAEVVLVSKKSEAEDEVRWVYLDIG
KFGGLAETMDESIRYAIRTDHDEDRMAPCVVAGPTCDSVDVLYEKNHYPLPVSLSIGDKV
WIEGAGAYTTTYAAVAFNGFPPLAQIVI
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatcgcatccgcgattacctgcgcgcgcgccgcgacctcggccaggacgagggc
ccggtgatggtcctcgacctcgatgtcgtgcgtgacaactacacggctttcgcccgcgcg
ctgcccgacacccgcgtgttctacgccgtgaaggcgaacccagccgcggaagtgctgcgc
ctgctcgccgagatgggctcctgcttcgacacggcttccgtggccgagatcgagatggcg
ctcgccgccggcgccaccgccgaccgcgtctccttcggcaacaccatcaagaaggagcgc
gacgtcgtccgcgcgctcaagctcggcatccgcctcttcgccgtcgattgccaggccgag
gtcgagaagatcgttcgcgcgagcgaggcggccggcatcgcggccggcgaggtgcaggtg
ttctgccgcatcctgtgcgacggcgccggtgcggattggccgctctcgcgcaagttcggc
tgcgagccggagatggcggtgaacgtgctggagcacgcccaccggcacggcctcaatgcc
tacggcgtctcgttccatgtcggttcgcagcaggccaacacggaagcctgggacggggcg
ctcgcctccgcctccgagatcttccgtgaatgcgctctgcgcggcatcggcctgtcgatg
gtcaatctcggcggcggcttcccgaccaagtacctcaagcaggtgccgggcgtggaaacc
tacggcgacgcgatcttccgtgcgctcaccaagcatttcggcaaccgcatcccggagacg
atcatcgagccgggccgcggcatggtcggcaatgccggcctgatcgaggccgaggtcgtg
ctcgtctccaagaagtcggaggccgaggacgaggtgcgctgggtctatctcgacatcggc
aagttcggtgggctggccgagaccatggacgagtcgatccgctacgcgatccgcaccgac
cacgacgaggaccgcatggcgccctgcgtcgtcgccggcccgacctgcgattcggtcgac
gtgctctacgagaagaaccactacccgctgccggtctccctctcgatcggtgacaaggtg
tggatcgagggcgcgggcgcctacaccacgacctacgcggcggtcgccttcaacggcttc
ccgcccctcgcgcagatcgtgatctga
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