Methylorubrum sp. GM97: MSPGM_23760
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Entry
MSPGM_23760 CDS
T10720
Symbol
rffB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
metq Methylorubrum sp. GM97
Pathway
metq00521
Streptomycin biosynthesis
metq00523
Polyketide sugar unit biosynthesis
metq00525
Acarbose and validamycin biosynthesis
metq00541
Biosynthesis of various nucleotide sugars
metq01100
Metabolic pathways
metq01110
Biosynthesis of secondary metabolites
metq01250
Biosynthesis of nucleotide sugars
Module
metq_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
metq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
MSPGM_23760 (rffB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
MSPGM_23760 (rffB)
01055 Biosynthesis of vancomycin group antibiotics
MSPGM_23760 (rffB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
MSPGM_23760 (rffB)
00525 Acarbose and validamycin biosynthesis
MSPGM_23760 (rffB)
Enzymes [BR:
metq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
MSPGM_23760 (rffB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
KR
Motif
Other DBs
NCBI-ProteinID:
BDL39786
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Position
2577436..2578494
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AA seq
352 aa
AA seq
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MRILVTGGCGFIGSALVLHLVQDLGHEVLTLDAMTYAANPISLQPLADDPRHRLEQADIC
DPARVHALYAEFRPEAVMHLAAESHVDRSITDPGAFVRTNVIGTQVMLDGARTHWESLDR
EAKATFRFLHVSTDEVYGSLPPDAFFTEESRYDPRSPYSASKAASDHLARAWHETYGLPV
LVTNCSNNYGPRHFPEKLIPLMILAALEGKPLPVYGDGLNERDWIHVEDHARGLVAVLER
GRLGETYLLGGRSVRNNLAVVKALCAAFDQLKPENGPHERLISFVADRPGHDRRYAIDPS
KAEAEVGWRPTKVFEQALTETVRWYLDNEAWWRPIREGRYSGERLGLAPKSA
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattctggtaacgggcggctgcggcttcatcggctccgccctcgtgctgcatctg
gtgcaggatctcggccacgaggtgctcaccctcgacgccatgacctacgccgccaacccg
atctcgctgcagccgctggcggacgatccgcgccaccgcctggaacaggccgacatctgc
gatccggcgcgcgtccacgccctctacgccgagttcaggcccgaggcggtgatgcatctg
gccgccgagagccatgtcgatcgctcgatcaccgatccgggtgccttcgtgcgcaccaac
gtcatcggcacccaggtcatgctcgacggcgcccgcacccattgggaaagcctcgaccgc
gaggccaaggcgacgttccgcttcctccacgtctcgaccgacgaggtctacggctcgctg
ccgccggacgcgttcttcaccgaggagagccgctacgatccgcgctcgccctactcggcg
tcaaaggcggcctccgaccatctcgcccgcgcctggcacgagacctacggcctgccggtt
ctggtgacgaactgctcgaacaattacggcccgcgccacttccccgagaagctgatcccg
ctgatgatcctggccgcgctggagggcaagccgctcccggtctacggcgacggcctgaac
gagcgcgactggatccatgtcgaggaccatgcccgcggcctcgtcgcggtgctggagcgc
ggccggctcggcgagacctacctcctgggcgggcgctcggtgcggaataacctcgccgtg
gtgaaggcgctttgtgccgccttcgaccagctcaagcccgagaacggcccgcacgagcgc
ctgatcagcttcgtcgccgaccggcccggccacgaccgccgctacgcgatcgacccgtcg
aaggcggaagccgaggtcggctggcggccgaccaaggtgttcgagcaggcgctgacggaa
accgtgcgctggtacctcgacaacgaggcgtggtggcgcccgatccgcgagggccgctat
tccggcgagcgcctcggcctcgcgcccaagagcgcctga
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