Methylorubrum sp. GM97: MSPGM_24160
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Entry
MSPGM_24160 CDS
T10720
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
metq Methylorubrum sp. GM97
Pathway
metq03030
DNA replication
metq03410
Base excision repair
metq03420
Nucleotide excision repair
metq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
metq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSPGM_24160 (polA)
03410 Base excision repair
MSPGM_24160 (polA)
03420 Nucleotide excision repair
MSPGM_24160 (polA)
03440 Homologous recombination
MSPGM_24160 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
metq03032
]
MSPGM_24160 (polA)
03400 DNA repair and recombination proteins [BR:
metq03400
]
MSPGM_24160 (polA)
Enzymes [BR:
metq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MSPGM_24160 (polA)
DNA replication proteins [BR:
metq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MSPGM_24160 (polA)
DNA repair and recombination proteins [BR:
metq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MSPGM_24160 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MSPGM_24160 (polA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Taq-exonuc
HHH_5
WHD_BrxR
HHH_2
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
BDL39826
LinkDB
All DBs
Position
2669780..2672923
Genome browser
AA seq
1047 aa
AA seq
DB search
MTEETQPQPAKPVCADDRVILVDGSSFIFRAYFQSINQDQKYNTRPSDGLPTGAVRLFCT
KIAQFLQEGAAGVKPTHLGIVFDKSEGSFRKELFPDYKGHRPDAPDDLKRQMPLMRDAVR
AFGLHAVELVRYEADDLIATYARQAEARGAEVIIVSSDKDLMQLVSDKIRFYDFESGAKG
KPGYRPERNLDREAIIAKWEGLAPEQIGDALALIGDTSDNVPGVPGIGLKTAAALIKEYG
SLEQLLERAGEIKQPKRREMLLANIDQAKLSRRLVALEESVPVPVPLDELGVPQPDPQKL
VGFLKAMEFNTLTRRIAQMLHVDPEAVKPDPALLPGAQPHAYSNAAGGSDAVPFFGDAVP
VDPETAAAPERTDGEAPPEAGEADPFADLDLPDQAPKKKRGSNEPTPATLVAARAAESVK
PFDTAAYETIATVAQLEAWIAESYEAGVIAVDTETDALDAAKAGLVGVSLATAPGRAAYI
PLAHVKPEVKGGDLFGESGAGADASDKQPGQIDFDTALKLLKPLLEDAGTLKVGQNLKYD
LSVLHRYGIDVRPFDDTMLISYVLDAGKGGHGMDELARRHLGHQPITFADVAGTGRNKVT
FDHVAIDKATAYAAEDADVTLRLWRMMKPRLVAEHRVTVYETLERPLVPVLARMERAGIA
IDRNMLSRLSGDFSQILARLEEEIQEDAGERFQVSSPKQIGDVLFGKMGLPGAKKTPSGQ
WATPATLLEELAQAGHDLPKKILNYRQLSKLKSTYTDSLQQHADRGTNRVHTSFALAATT
TGRLSSSDPNLQNIPIRTEEGRRIRRAFVAPEGKKLISADYSQIELRLLAHIADIPQLRE
AFEQGIDIHAATASAMFGVALDQMTGDLRRRAKTINFGIIYGISAFGLADRLGIGREEAS
AFIKQYFERFPGIRDYIDTTKRSCREKGYVTTLFGRVCHYPQIRSNNPSERASVERQAIN
APIQGTAADIIRRAMTRMEDALEAKKLTARMLLQVHDELVFEVPDDEVEATIPVIAGVME
EAPAPALTLRVPLVVEARAAGNWEEAH
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagagacgcaaccgcaaccggccaagcccgtctgcgccgatgaccgggtgatc
ctcgttgacggctcgtccttcatcttccgagcgtacttccagtcgatcaatcaggaccag
aagtacaacacgcggccctccgacggtctgccgaccggcgcggtgcgcctgttctgcacc
aagatcgcccagttccttcaggagggcgcggcgggtgtgaagccgacccatctcggcatc
gtcttcgacaagtccgagggctcgttccgcaaggagctgttcccggactacaagggccac
cgccccgacgcgccggacgacctcaagcgccagatgccgctgatgcgcgatgcggtgcgc
gccttcgggctgcatgcggtcgagttggtgcgctacgaggccgacgacctgattgcgacc
tacgcgcggcaggccgaggcgcgcggcgccgaggtcatcatcgtgtcctccgacaaggac
ctgatgcaactcgtctcggacaagatccgattctacgatttcgagtcgggcgccaagggc
aagcccggctaccgccccgagcgcaatctcgaccgcgaggcgatcatcgccaagtgggag
ggcctcgcgccggagcagatcggcgacgcgctggcgctgatcggcgacacttccgacaac
gtgccgggcgtgcccggcatcggcctgaagacggcggccgcgctcatcaaggaatacggc
agcctggagcagctcctggagcgagcaggcgagatcaagcagcccaagcgccgggaaatg
ctgctcgccaacatcgatcaggccaagctctcgcgccgcctcgtcgcgctcgaggagagc
gtgccggtgccagtgccgctcgacgaactcggcgtgccgcagcccgatccgcaaaagctg
gtcggcttcctgaaggccatggagttcaacaccctgacgcggcgtatcgcgcagatgctc
catgtcgatcccgaggcggtaaagcccgatccggctttgctgccgggcgcacagccccac
gcctatagcaacgcggccggcggcagtgacgccgtgccgttcttcggcgacgccgtaccg
gtcgatcccgagaccgccgccgcacccgagcggacggatggggaggccccgcccgaagcg
ggcgaggccgatcccttcgccgatctcgacctgccggatcaggctccgaagaagaagcgc
ggctccaacgagccgacgcccgcgaccctcgtggccgcccgtgcggcggaatcggtcaag
ccgttcgatacggccgcctacgagacgatcgccaccgtggcgcagctcgaggcttggatc
gccgagagttacgaggccggggtgatcgcggtcgataccgagaccgacgcgctcgacgcg
gccaaggcgggactcgtcggcgtctcgctcgccaccgcgccggggcgggccgcctatatc
ccgctcgcccacgtcaagcccgaggtgaagggcggcgacctgttcggcgagagcggggca
ggggccgatgcctccgacaagcagcccggccagatcgatttcgacactgccctcaagctg
ctcaagccgctgctcgaggatgccggcacgctcaaggtcggccagaacctgaaatacgac
ctctcggtgctgcaccgctacggcatcgacgtgaggcccttcgacgacacgatgctgatc
tcctacgtgctcgatgccggcaagggcgggcacggcatggacgaactcgcccgccgtcat
ctcggccaccagccgatcaccttcgccgacgtcgccggcaccggccgcaacaaggtcacc
tttgaccatgtggcgatcgacaaggcgacggcctacgcggcggaagacgccgacgtcacc
ttgcgcctgtggcggatgatgaagccgcgcctcgtcgccgagcaccgggtgaccgtctac
gagacgctggagcgcccgctggtgccggtgctggcgcggatggagcgggccggcatcgcc
atcgaccgcaacatgttgagccgactctcgggcgacttctcgcagatcctggcgcggctg
gaggaggagattcaggaggacgcgggcgagcggtttcaggtctcgtcgccgaagcagatc
ggcgatgtgctgttcggcaagatgggattgcccggtgcgaagaagacgccgtccggccag
tgggccacgcccgcgacgcttctcgaagagctggcccaggccggccacgacctgccgaag
aaaattctcaactatcgccagctttccaagctgaaatcgacctataccgactcgctgcag
cagcacgcagaccgggggaccaaccgcgtccatacctcgttcgccctcgcggcgacgacg
accggccggctctcctcctcggatccgaacctgcagaacatcccgatccgcacggaggag
gggcggcgcatccgccgcgccttcgtcgcgcccgagggtaagaagctgatctcagccgat
tacagccagatcgagctgcgcctgctcgcgcacatcgccgacatcccgcaattgcgcgaa
gcgttcgagcagggaatcgacatccacgcggccacggcgtcggccatgttcggcgtcgcc
ctcgaccagatgaccggcgacctgcggcgccgggccaagacgatcaatttcggcatcatc
tacggcatctcggccttcgggctggccgaccgcctcggcatcggccgcgaggaggcatcg
gccttcatcaagcagtatttcgagcggtttcccggcatccgcgactacatcgacaccacc
aagcgctcgtgccgcgagaagggctacgtgacgaccctgttcggccgcgtctgccactac
ccgcagatccgctcgaacaacccgtccgagcgggcgagcgtggagcgccaagccatcaac
gccccgatccagggcaccgccgccgacatcatccgccgcgccatgacgcggatggaggat
gcgctggaggccaaaaagctcaccgcgcggatgctgctgcaagtgcacgacgaactcgtg
ttcgaggtgcccgacgatgaggtcgaggcgacgatccccgtgatcgccggggtgatggaa
gaggcgcccgcgccggccctgacgctgagggtgccgctggtggtcgaggcgcgggccgcg
ggcaactgggaagaggcgcactga
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integrated database retrieval system
