Methylorubrum sp. GM97: MSPGM_26380
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Entry
MSPGM_26380 CDS
T10720
Name
(GenBank) hypothetical protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
metq Methylorubrum sp. GM97
Pathway
metq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
metq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MSPGM_26380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metq03400
]
MSPGM_26380
Enzymes [BR:
metq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
MSPGM_26380
DNA repair and recombination proteins [BR:
metq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MSPGM_26380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BDL40048
LinkDB
All DBs
Position
2902914..2903474
Genome browser
AA seq
186 aa
AA seq
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MADAPHVRPLRAFARMIAAERGAAVPDPDPLDGGVEARLLLLLETPGPSIGRTGFVSRDN
PTGTAANLFRFLAEAGIARRDTLIWNAVPWVIHAPGALNRAPLRSEASAAAPYFAPLLAL
LPRLAVVVPAGRFAREASAPLAALRPELPVVAIPHPSPTYVCTAPAVRERILAGLAEAAA
HLAATP
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgcgccgcatgtccggccgctgcgcgccttcgcccgcatgattgccgccgag
cggggcgcggccgtccccgatcccgatccgctcgatggcggcgtggaggcgcggctgctc
ctgctgctcgagacgccgggcccctcgatcggccgcaccggcttcgtctcccgcgacaac
ccgaccggcaccgccgccaacctgttccgcttcctggccgaggccgggatcgcgcgacgg
gacacgctgatctggaacgccgtgccctgggtgatccacgcgcccggcgccctcaaccgc
gcgccgcttcgatcggaagcgagcgccgccgcgccatatttcgcgccgctgctggctctg
ctgccgcggctcgccgtggtcgtcccggccgggcgcttcgcgcgggaagcgtcggcgccg
ctcgccgccttgcggccggaactgcccgtggtggcgataccccatccgagcccgacgtat
gtctgcaccgcgcccgccgtgcgcgagcgcatcctggcgggtttggcagaggcggccgcg
catctcgctgcgacgccgtga
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