Methylorubrum sp. GM97: MSPGM_26820
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Entry
MSPGM_26820 CDS
T10720
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
metq Methylorubrum sp. GM97
Pathway
metq00900
Terpenoid backbone biosynthesis
metq01100
Metabolic pathways
metq01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
metq00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
MSPGM_26820
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
metq01006
]
MSPGM_26820
Enzymes [BR:
metq01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
MSPGM_26820
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
MSPGM_26820
2.5.1.29 geranylgeranyl diphosphate synthase
MSPGM_26820
Prenyltransferases [BR:
metq01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
MSPGM_26820
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
BDL40092
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Position
2956123..2956989
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AA seq
288 aa
AA seq
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MDVGRRIETVLDNAVSHAEAPGAPPLLAEAIRYAVFPGGHRIRPRLCLAVALACGDDDPA
TSEAAAAAIELLHCASLVHDDLPCFDDAPMRRQKPSVHAAFGVPLAVLTGDALIVAAFET
LARGVTRSPTRLAGLVGLIARAAGSPAGIVAGQAWESEPYVDLVEYQQAKTGALFAAATV
AGAAAAGAPPLPWRLLGECLGAAYQVADDLRDVACRQEEIGKPAGRDATLGRPNAAALLG
MGGALERLKHLTQEAIDVIPPCRGQDAMRTEIEAQTRLFMPASLRAMA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcggccggcggatcgagacggtgctcgacaatgcggtttcgcatgcggaggcg
ccgggtgcgccgccgttgctggcggaggcgatccgctacgcagtcttccccggcggccac
cgcatccgcccgcggctctgcctcgccgtcgcgctcgcctgcggcgacgatgaccccgcc
acctccgaggcggccgccgcggcgatcgaactcctgcactgcgcctctctcgtccacgac
gacctgccgtgcttcgacgacgcgccaatgcgccgccagaagccctcggtccatgcggcc
ttcggcgtgccgctcgcggtgctcacaggcgacgcgctgatcgtcgccgccttcgagacg
ctggcgcggggcgtgacccgctcgcccacgcgcctcgcgggtctcgtcgggctgatcgcc
cgcgccgccggctcgcccgccggcatcgtcgccgggcaggcctgggaatccgagccttac
gtggatctggtcgagtaccagcaggccaaaaccggcgcgctgttcgccgcggccacggtg
gccggtgccgccgccgcgggagcgccgccgctcccctggcgcctgctcggcgaatgcctc
ggggcggcttatcaggtcgccgacgatctgcgcgacgtcgcctgccgccaggaggagatc
ggcaagcctgccggtcgcgacgccacgctcgggcgtccgaacgcggcggccctgctcggg
atgggcggtgccctggagcgcctgaagcaccttacgcaggaggcgatcgacgtgattccc
ccctgccgcgggcaggacgccatgcgcaccgagatcgaggcgcagacccggctgttcatg
cccgcctccttacgagcgatggcttga
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