Methylorubrum sp. GM97: MSPGM_27370
Help
Entry
MSPGM_27370 CDS
T10720
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
metq Methylorubrum sp. GM97
Pathway
metq00541
Biosynthesis of various nucleotide sugars
metq01100
Metabolic pathways
metq01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
metq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
MSPGM_27370 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
metq01005
]
MSPGM_27370 (kdsA)
Enzymes [BR:
metq01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
MSPGM_27370 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
metq01005
]
Lipid A
MSPGM_27370 (kdsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
BDL40147
LinkDB
All DBs
Position
3019214..3020062
Genome browser
AA seq
282 aa
AA seq
DB search
MPETAQTSGSVVQTGGVAFANHLPLALIAGPCQLEGRNHALEIAAALKEMAAKLGIGLVF
KSSFDKANRTSGRTARGVGLDEALPVFAEIRESLGLPVLTDVHEAEHCARAAQAVDILQI
PAFLCRQTDLLLAAAATGRAVNVKKGQFLAPWDMAHVAAKVTEAGNPNVIVTERGASFGY
NTLVSDMRSLPIMARVTGGAPVVFDATHSVQQPGGQGATSGGQREFVAVLARAAVAVGVA
GVFIETHPDPDRAPSDGPNMVALADLPALIETLMAFDRLAKA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagactgcacagacttccggttccgtcgtccagaccggcggcgtcgccttcgcc
aatcatctgccgctggcgctgatcgccggcccgtgccagctcgaagggcgaaatcacgcc
ctcgaaatcgctgccgctctcaaggagatggcggccaaactcggcatcggcctcgtgttc
aagtcgtccttcgacaaggccaaccggacctccggccgcaccgcgcggggcgtcggcctc
gacgaggcgcttccggtcttcgccgagatccgcgagagcctcgggcttcccgtgctcacc
gacgtgcacgaggccgagcattgtgcgcgggcggcgcaagccgtcgacatcctgcagatc
ccggccttcctctgccgccagaccgacctcctgctcgccgccgccgccactgggcgggcg
gtcaacgtcaagaagggccagttcctcgcgccctgggatatggcccatgtcgcggccaag
gtgaccgaggccggcaaccccaacgtcatcgtcaccgagcggggtgcctccttcggctac
aacacgctcgtctccgacatgcgctcgctgccgatcatggcccgcgtcaccggcggcgca
ccggtggtgttcgatgcaacgcactcggtgcagcagccgggcgggcagggcgccacctcc
ggcgggcagagggagttcgtcgcggtgctcgcccgcgccgcggtggcggtcggcgtggcc
ggcgtgttcatcgagacccatcccgatcccgaccgcgcgccctccgacgggccgaacatg
gtggccttggccgatctgcccgctttgatcgagaccctcatggcgttcgaccgtctcgcc
aaggcgtaa
DBGET
integrated database retrieval system
