KEGG   Methylorubrum sp. GM97: MSPGM_31160
Entry
MSPGM_31160       CDS       T10720                                 
Name
(GenBank) DNA ligase-associated DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
metq  Methylorubrum sp. GM97
Brite
KEGG Orthology (KO) [BR:metq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:metq03400]
    MSPGM_31160
Enzymes [BR:metq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     MSPGM_31160
    5.6.2.6  RNA 3'-5' helicase
     MSPGM_31160
DNA repair and recombination proteins [BR:metq03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    MSPGM_31160
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: BDL40526
LinkDB
Position
3401296..3403806
AA seq 836 aa
MPPPPDLPPRFSAWFASRGWSPRPHQLELLAIVRGGRSALLVAPTGAGKTLAGFLPSLVE
LSERQGSASKGGKAKGLHTLYVSPLKALAVDIARNLDAPIEGMDLPVTVETRTGDTPAHK
RARQIQRPPDILLTTPEQLSLLLAHREAEAFFAGLKTIVLDELHALVTSKRGDLLSLALA
RVRRLAPEARAIGLSATVREPEELQKYLVGQVPGEDRRADLVVVKGGAKPDLHMLEVNRT
LPLAGHTAWHSMPAIYDLIRAHRMVLVFVNTRLQAEYTFQELWRLNDDTLPIALHHGSLD
ATQRRRVEAAMAAGQLRAIVCTATLDLGIDWGDVDLVVNLGAPKGASRIMQRIGRANHRM
DEPSKAYLVPGNRFEMLECRAALDAVEEAAQDTPDARLGAPDVLAQHVLGMACADAFDPL
ELYDEVISAAPYATLSWEDFEAVVDYVATGGYALRAYERFAKILRGPDGKWRVRDARVAQ
QYRMNIGTIVESTHIKVRMARSLRSKPGTVLPKGGRTLGEIEEDFAETLTVGDTFLFAGE
VLRFEGLAEDECLVTRAGPGTDPAIPSYAGSKFPLSTFLAARVRAIIADPFEWDRLPRQL
ADYLAQQRRHSVLPGERDLLVETFARAGRHYLTAFPFEGRLAHQTLGMLLTRRLERARLR
PLGFAANDYGIAIWCTKDLSERAALSPGFMEALFDEDMLGDDLEAWLDESAMMKRTFRQC
AVIAGLIERRFPGQKKTGRQVTISTDLIYDVLRRHQPDHLLLRAARQDAATGLLDVTRLG
MMLRRIRGRITHRALDRVSPLSVSVMLEIGRERVYGEGADEILAEAEAELLQEALG
NT seq 2511 nt   +upstreamnt  +downstreamnt
gtgccaccgccccccgacctcccgccgcgcttctccgcgtggttcgcctcccgcggctgg
tcaccccgcccgcatcagctcgaactgctcgcgatcgtccggggcggacgctcggcgctg
ctcgtcgccccgacgggagcgggcaagacgctggccggcttcctgccgagcctggtcgag
ctgagcgagcggcaaggaagcgcgagcaagggcggcaaggcgaagggactgcacaccctc
tacgtctcgccgctcaaggcgctggcggtcgacatcgcccgcaacctcgacgcgccgatc
gaaggcatggatctgccggtcacggtcgagacccgcaccggcgacacgccggcgcacaag
cgcgcgcgtcagatccagcgcccgcccgacatcctgctcaccacgcccgaacagctctcg
ctgctgctcgcccaccgggaggcggaggccttcttcgccgggctgaagacgatcgtgctc
gacgagttgcacgccctcgtcacctcgaagcgcggcgatctcctctccctcgcgctcgcc
cgggtgcgccggctggcgccggaggcccgcgccatcggcctctcggccaccgtgcgcgaa
ccggaggaactccaaaagtacctcgtcggccaagtgccgggcgaggaccgccgggccgac
ctcgtcgtggtcaagggcggcgccaagcccgacctgcacatgctcgaagtgaaccggacg
ctcccgctcgccggccacaccgcgtggcactcgatgccggcgatctacgacctgatccgg
gcgcaccgcatggtgctcgtcttcgtcaacacccgcctccaggccgagtacaccttccag
gagctgtggcggctcaacgacgacacgctgccgatcgccctgcatcacggctcgctcgac
gccacgcagcgccgccgggtcgaggcggcaatggcggcggggcagctgcgcgccatcgtc
tgcaccgcgacgctcgatctcggcatcgactggggcgacgtcgatctcgtcgtcaatctc
ggcgcgccgaagggcgcgagccggatcatgcagcggatcggacgggccaaccaccggatg
gacgagccatcgaaggcctatctcgtccccggcaaccgcttcgagatgctggaatgccgc
gccgccctcgacgcggtggaggaggcggcccaggacacgcccgacgcccgcctcggcgcc
cccgacgtgctcgcccagcacgtgctcggcatggcctgcgccgacgcattcgatccgctc
gaactctacgacgaggtcatctcggcggcgccctacgcgaccctgtcgtgggaggatttc
gaggcggtggtcgattacgtcgccaccggcggttacgccctgcgcgcctacgagcgcttc
gccaaaatcctgcgcgggcccgacggcaagtggcgggtgcgcgacgcgcgggtggcacag
caataccgcatgaacatcggcaccatcgtcgagtcgacgcacatcaaggtgcggatggcc
cgcagcctgcgctccaagcccggcaccgtgctgccgaagggcggacggacgctcggtgaa
atcgaggaggatttcgccgagacgctgaccgtcggcgacaccttcctgttcgcgggcgag
gtgctgcgcttcgaggggctggccgaggatgaatgcctcgtcacgcgggccgggcccggc
accgatccggcgatcccctcctatgccggctcgaaattcccgctctcgaccttcctcgcc
gcacgggtacgggcgatcatcgccgacccgttcgagtgggaccgcctgccgcgccagctc
gcggactacctcgcgcagcagcgccgccactccgtgctgccgggcgaacgcgacctcttg
gtcgagacgtttgcgcgggccgggcgccactatctcaccgccttcccgttcgaggggcgg
ctcgcccaccagacgctcggcatgctgctgacccgccgcctggagcgtgcccggctacgc
ccgctcggatttgccgccaacgattacggcatcgccatctggtgcacgaaggatctgagc
gagcgcgccgcgctctcgcccggcttcatggaggccctgttcgacgaggacatgctcggc
gacgatctggaggcctggctcgacgagtcggcgatgatgaagcgcaccttccgccaatgc
gcggtcatcgccgggctgatcgagcggcgctttcccggccagaaaaagaccggccgacag
gtcacgatctcgaccgatctgatctacgacgtgctgcgccgccaccagcccgaccacctg
ctcctgcgcgccgcgcggcaggatgcggcaaccggactcctcgacgtgacccgcctcggc
atgatgctgaggcgtatccgggggcgaatcacccacagggcgctcgaccgggtctcgccg
ctctccgtctccgtcatgctcgaaatcgggcgtgagcgggtctacggggagggggccgac
gagatcctggccgaggccgaagccgagcttctccaagaggcgctcggctga

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