KEGG   Methylorubrum sp. GM97: MSPGM_31300
Entry
MSPGM_31300       CDS       T10720                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
metq  Methylorubrum sp. GM97
Pathway
metq00740  Riboflavin metabolism
metq01100  Metabolic pathways
metq01110  Biosynthesis of secondary metabolites
metq01240  Biosynthesis of cofactors
metq02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:metq00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    MSPGM_31300 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    MSPGM_31300 (ribD)
Enzymes [BR:metq01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     MSPGM_31300 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     MSPGM_31300 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: BDL40540
LinkDB
Position
complement(3414925..3416055)
AA seq 376 aa
MTGRAVDLSEQQALDRRAMRLALALGRRNLGRTWPNPSVGAVVVAEGRIVGQAVTAVGGR
PHAEPLALAMAGEAARGATLYVTLEPCSHHGRTPPCTDATIAAGIARVVTAIEDPDPRVA
GRGHAGLRAAGITVETGLLREEAARDHRGHFSRVTRGRPSLHLKLARTRDGFAAPSTGER
LKITGSVADGAVHLWRAHADAIMVGIGTARADDPSLTVRLPGLAERSPLRIVLDSTLRLN
PASHLVRGARDLPTLVLTGRGAPAHARRMLASFGVEIAFVPTDAEGRIDLPAALKALAER
GLTRICSEGGPALADALAAHDLIDACTLITGSVTLGEAGGLPVLGANLARRLADGSLSVV
ETRDYGPDTAVTYERI
NT seq 1131 nt   +upstreamnt  +downstreamnt
gtgacggggcgagccgtggacctgtccgagcagcaagccctcgaccggcgcgccatgcgc
ctcgccctcgccctggggcggcgcaacctcggccgaacctggccgaatccgagcgtcggc
gccgtcgtcgtggccgagggccgcatcgtcgggcaggcggtcacggcggtcggcggtcgc
ccgcatgcggagccgctggcgctcgccatggccggcgaggccgcacgcggggccaccctc
tacgtcaccctcgagccctgctcgcatcacggccgcacgccgccctgcaccgacgcgacc
atcgccgccggaatcgcccgcgtggtcaccgcgatcgaggatcccgatccgcgggtggcc
gggcgcggccatgcgggtttgcgcgcggccgggatcacggtggaaaccggcctgctgcgc
gaggaggccgcccgcgatcatcgcggccatttctcccgcgtgacgcgcgggcgcccgagc
ctgcacctcaagctcgcccggacccgcgacggcttcgccgcgccctcgaccggtgagcgc
ctgaagatcacaggttcggtcgcggatggcgcggtgcatctgtggcgggcccacgccgac
gcgatcatggtcggcatcggcacggctcgcgccgacgacccctcgctgaccgtccggctt
ccggggctcgccgagcgctcgccgctgcggatcgtgcttgactcgacgttgcgcctcaac
ccggccagccacctcgtgcgcggggcccgtgacctgccgaccctggttctcaccgggcgc
ggcgccccggcccatgcccggcggatgctcgcctccttcggcgtcgagatcgccttcgtt
ccgaccgacgcagagggccgcatagacttacccgccgcgctaaaagcgctggcggagcgc
ggcctgacccggatctgcagcgagggcgggccggcgcttgccgacgcgctcgcggcgcac
gatctcatcgatgcctgcacgctcatcaccggctccgttacgctgggcgaggccggcggc
ttgccggtgctcggggccaacctcgcccgccgcctcgccgacggctcgctgagcgtggtc
gagacccgcgattacggccccgacacggcggtcacctacgagaggatctga

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