Methylorubrum sp. GM97: MSPGM_32020
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Entry
MSPGM_32020 CDS
T10720
Symbol
fadB_1
Name
(GenBank) enoyl-CoA hydratase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
metq Methylorubrum sp. GM97
Pathway
metq00071
Fatty acid degradation
metq00280
Valine, leucine and isoleucine degradation
metq00310
Lysine degradation
metq00362
Benzoate degradation
metq00380
Tryptophan metabolism
metq00410
beta-Alanine metabolism
metq00640
Propanoate metabolism
metq00650
Butanoate metabolism
metq00907
Pinene, camphor and geraniol degradation
metq00930
Caprolactam degradation
metq01100
Metabolic pathways
metq01110
Biosynthesis of secondary metabolites
metq01120
Microbial metabolism in diverse environments
metq01200
Carbon metabolism
metq01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
metq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
MSPGM_32020 (fadB_1)
00650 Butanoate metabolism
MSPGM_32020 (fadB_1)
09103 Lipid metabolism
00071 Fatty acid degradation
MSPGM_32020 (fadB_1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
MSPGM_32020 (fadB_1)
00310 Lysine degradation
MSPGM_32020 (fadB_1)
00380 Tryptophan metabolism
MSPGM_32020 (fadB_1)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
MSPGM_32020 (fadB_1)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
MSPGM_32020 (fadB_1)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
MSPGM_32020 (fadB_1)
00930 Caprolactam degradation
MSPGM_32020 (fadB_1)
Enzymes [BR:
metq01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
MSPGM_32020 (fadB_1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
MSPGM_32020 (fadB_1)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
MSPGM_32020 (fadB_1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DAO
NAD_binding_2
F420_oxidored
UDPG_MGDP_dh_N
NAD_Gly3P_dh_N
Sacchrp_dh_NADP
FAD_binding_3
ApbA
NAD_binding_8
2-Hacid_dh_C
Pyr_redox_2
TrkA_N
Pyr_redox
GIDA
AlaDh_PNT_C
Shikimate_DH
RS_preATP-grasp-like
Motif
Other DBs
NCBI-ProteinID:
BDL40612
LinkDB
All DBs
Position
complement(3488131..3490332)
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AA seq
733 aa
AA seq
DB search
MTATENFRFETDADGIALATWDMPGRSMNVITMEVMAELERIVDAVVADEAIKGCVIVSG
KNNFSAGADLTMLQGLGVEYERLKASEGEEVAMRHFFEESRRLSLVFRKLETCGKPFAAA
VHGLCLGGAFELALSCHHRVLADDDKTRVGLPEIKVGLFPGGGGTQRVSRLMQTGDALQM
LFKGEQIRALMAKNMGLAHAVAPAAEIVERAKAWIREGGSAVAPWDVPKFKAPSGKVYSP
AGMMIWPPANAIYRRETHDNYPAANAILASVYEGLQLPMDLGLRVESRYFAHILRTKEAQ
AMIRTLFISMGEINKGARRPKDVEATKVGKVGVIGAGFMGAGIAYVTAQAGMEVVLIDRD
QEAADAGKAHCHKLITGQINRGKAKTADRDALLARITATPDYGALSDCDLVIEAVFEDPK
VKAEVIAKVEAALPAHAIFASNTSTLPISGLAQTSKRPEQFVGIHFFSPVEKMLLVEIIR
GNQTGDRAVATALDYVRAIKKTGIVVNDSRGFFANRCVLAYIHEGHKMLTEGVPPAMIEN
VARMAGMPVGPLSLNDEVALDLGLKIMRATEAQLGEGAVDPDQKRLLVAMVETHGRLGRK
NKRGFYDYPEGGQKTLWPGLAEIQPNRLDPEGIDIDELKHRFLVVQALEAARTMQEGVVT
DPREADVGSILGFGFAPFTGGALSYIDFMGAKAFVALARQLEARHGPRFTPPDNLLAMAE
SGRRFYDALKQAA
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaaccgagaatttccgcttcgagaccgatgccgacggcatcgcgctcgcgacc
tgggacatgccgggccgttcgatgaacgtcatcaccatggaggtgatggcggagctggag
cggatcgtcgacgcggtcgtcgccgacgaggccatcaagggctgcgtcatcgtctcgggg
aagaacaacttctccgccggcgccgacctcaccatgctccagggcctcggggtcgagtac
gagcggctgaaggcgagtgagggcgaggaggtggccatgcgccacttcttcgaggaatcg
cggcgcctcagcctcgtgttccgcaagctcgagacctgcggcaagccgttcgcggcggcg
gtgcacggcctgtgcctcggcggcgccttcgagctggcgctgtcctgccatcaccgggtg
ctcgccgacgacgacaagacccgcgtcggcctgcccgagatcaaagtcggcctattcccc
ggcggtggcggcacgcagcgcgtgtcccgtctgatgcagaccggcgacgcgctgcagatg
ctgttcaagggcgagcagatccgcgcgctcatggccaagaacatggggctggcccacgcc
gtcgccccggccgcggagatcgtcgagcgggccaaggcctggatccgcgagggcggctcg
gcggtggcaccctgggacgtgccgaagttcaaggcgccgtccggaaaggtctactcgccc
gccggcatgatgatctggccgccggccaacgcgatctaccgccgcgagacccacgacaat
tatccggccgccaatgcgatcctggcctcggtctacgagggcctgcagctgccgatggat
ctcggcctccgggtcgagagccgctacttcgcccatatcctgcgcaccaaggaagcgcag
gcgatgatccgcaccctgttcatctccatgggtgagatcaacaagggcgcccgccgcccg
aaggacgtggaggcgaccaaggtcggcaaggtcggcgtgatcggcgccggcttcatgggc
gcgggcatcgcctacgtcacggcgcaggccgggatggaggtcgtgctgatcgaccgcgac
caggaggcggccgatgccggcaaggcgcattgccacaagctcatcaccggccagatcaac
cgcggaaaggcgaagaccgccgaccgcgacgcgctgctcgcccgcatcaccgccacgccc
gattacggcgccctgtccgattgcgacctcgtgatcgaggcggtgttcgaggacccgaag
gtcaaggccgaggtgatcgccaaggtcgaggcggcgctgccggcgcacgcgatcttcgcc
tccaacacctcgaccctgccgatctccggcctcgcccagacctcgaagcggcccgagcag
ttcgtcggcatccacttcttctcgccggtggagaagatgctgctcgtggagatcatccgc
ggcaaccagaccggcgaccgcgcggtggccaccgccctcgactacgtgcgcgcgatcaag
aagaccggcatcgtcgtcaacgattcccgcggcttcttcgccaaccgctgcgtgctcgcc
tacatccatgagggccacaagatgctcaccgagggcgtgcccccggcgatgatcgagaac
gtggcgcggatggccggcatgccggtcggcccgctctcgctcaacgacgaggtggcgctc
gatctcggcctcaagatcatgcgggcgaccgaggcgcagctcggcgagggcgccgtcgat
ccggaccagaagcggctcctcgtcgcgatggtcgagacgcatggccggctcgggcgcaag
aacaagcgcggcttctacgactaccccgagggcggccagaagacgctctggccggggctc
gccgagatccagccgaaccggctcgacccggagggcatcgacatcgacgagctgaagcac
cgtttcctcgtggtgcaggcgctggaggccgcccgcacgatgcaggagggcgtggtgacc
gatccgcgcgaggcggatgtcggctcgatcctcggcttcggcttcgcccccttcaccggc
ggcgcgctgtcctacatcgacttcatgggcgccaaggccttcgtggcgctggcccggcag
ttggaggctcggcacggtccccgcttcaccccgccggacaacctcctggcgatggccgaa
tccggaaggcgcttctacgacgcgctgaagcaggcggcgtaa
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