Methylorubrum sp. GM97: MSPGM_32720
Help
Entry
MSPGM_32720 CDS
T10720
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
metq Methylorubrum sp. GM97
Brite
KEGG Orthology (KO) [BR:
metq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
metq03032
]
MSPGM_32720 (topA)
03400 DNA repair and recombination proteins [BR:
metq03400
]
MSPGM_32720 (topA)
Enzymes [BR:
metq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MSPGM_32720 (topA)
DNA replication proteins [BR:
metq03032
]
Prokaryotic type
DNA Topoisomerases
MSPGM_32720 (topA)
DNA repair and recombination proteins [BR:
metq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MSPGM_32720 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Milton
Motif
Other DBs
NCBI-ProteinID:
BDL40682
LinkDB
All DBs
Position
complement(3564007..3566739)
Genome browser
AA seq
910 aa
AA seq
DB search
MKVVVVESPAKAKTINKYLGRDYEVLASFGHIRDLPAKDGSVDPEADFAMIWEVEDRGAK
RVSEIARAVKGAEKLILATDPDREGEAISWHVIEALTARKALKGIPVERVTFNAITKASV
DAAMKKPRQIDQALVDAYLARRALDYLVGFNLSPVLWRKLPGARSAGRVQSVALRLVVER
EMEIERFKPREYWSIIATLVTEAGGVFEARLVGADGKRIQRLDVGNAEEAAAFKRDLELA
TFQVASIEAKPAKRHPQPPFTTSTLQQEASRKLGMAPAQTMRVAQRLYEGVDVGGETVGI
ITYMRTDGVDMAPEAIQDARQVIGREFGDAYVPSAPRKYTVKAKNAQEAHEAVRPTDMGR
LPKHVARHLEPEQAKLYDLIWTRTIASQMESAELERTTVEVSANVGPRRIDLRATGQVVK
FDGFLALYQEGKDDEEDEDAKRLPAMKAGDALKRERIASTQHFTEPPPRYSEASLVKRME
ELGIGRPSTYAAVLQTLRDREYVRIEKKRLQPEDKGRLVTGFLESFFKRYVEYDFTASLE
EQLDRVSNAEIDWRSVLRDFWRDFSAAIGGTKELRVAEVLEALNGLLGPHIFPEKADGGD
PRACPTCGAGQLSLKLGKFGAFIGCSNYPECKYTRQLSASGVEGEGDGSSAEGGQPGVRV
LGDDPATGLPVTLRDGRFGPFVQLGEASAEKGAEKPKRSSLPKGTTPGSVTLEIALRLLS
LPREVAKHPETGEPILANLGRFGPYVQHGKTYANLGKDDDVLEIGANRAIDLIVAKEQGG
GRGRPSSDPGRTLGQHPDGAALVVKAGKYGPYVSDGSVNATLPKTMAAESLTLEQAIDLV
NAKRASGGGKKPVRKTASRARAPAKKAEAGEAKKPAVRKTAAKPAAKATATKAAAKPAAA
KKATAKTKAG
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcgtcgtcgtcgagtcgccggccaaggccaagacgatcaacaaatacctgggg
cgcgattacgaggttctggcctcgttcggccatatccgcgatctgccggctaaggacggc
tcggtcgatccggaggccgacttcgccatgatctgggaggtggaggatcgcggcgccaag
cgcgtgtccgagatcgcccgcgccgtgaagggagccgagaagctcatcctcgcgaccgac
ccggatcgcgagggcgaggcgatctcctggcacgtcatcgaggcgctcaccgcccgcaag
gcgctgaagggcatccccgtcgagcgcgtgaccttcaacgccatcaccaaagcgtcggtc
gacgcggcgatgaagaagccgcgccagatcgaccaggccctggtcgatgcctatctcgcg
cgccgcgccctcgattacctcgtcggcttcaacctctccccggtgctgtggcgcaagctg
cccggcgcccgctcggccggccgcgtgcagtcggtggcgctccgcctcgtggtcgagcgc
gagatggagatcgagcgcttcaagccgcgtgagtactggtcgatcatcgccacgctggtg
acggaagccggcggcgtgttcgaggcccggctcgtcggcgccgacggcaaacgcatccag
cgcctcgacgtcggcaatgccgaggaggcggcggcgttcaagcgtgatctcgaactcgcg
accttccaggttgcgagcatcgaagccaagcccgctaagcgccatccgcagccgcccttc
accacctccacgctgcagcaggaggcgtcccgcaagctcgggatggccccggcgcagacc
atgcgggtcgcgcagcggctctacgagggcgtggatgtaggcggcgagaccgtcggcatc
atcacctacatgcgaaccgacggcgtcgacatggcgccggaggcgatccaggacgcgcgc
caagtgatcggccgcgaattcggcgacgcttacgtccccagcgcgccgcgcaaatacacc
gtcaaggccaagaacgcgcaggaggcccacgaggccgtgcgcccgaccgatatgggccgg
ttgccgaagcacgtcgctcgccacctcgagccggagcaggccaagctctacgacctgatc
tggacccgcaccatcgcgagccagatggaatcggccgagctggagcgcaccaccgtcgag
gtgagcgcgaatgtcggcccgcgccggatcgacctgcgcgccaccggtcaggtcgtgaag
ttcgacggcttccttgcactctatcaggagggcaaggacgacgaggaggacgaggatgcc
aagcgcctgccggcgatgaaggcgggcgacgcgctcaagcgcgagcgcatcgcctcgacc
cagcacttcaccgagccgccgccgcgctactccgaggccagcctcgtcaagcggatggaa
gaactcggcatcggccggccctcgacctatgcggcggtgctgcaaaccctgcgcgaccgc
gaatatgtccgcatcgagaagaagcgcctccagccggaggacaagggacggctcgtcacc
ggcttcctcgaaagcttcttcaagcgctatgtcgagtacgacttcaccgcgagcctggaa
gagcagctcgaccgggtttcgaatgccgagatcgactggcgctccgtgctgcgcgacttc
tggcgtgatttttccgccgcgatcggcggcaccaaggaattgcgcgtcgcggaggttctc
gaggcgctcaacggcctgctcgggccccacatcttccccgagaaggcggatggcggcgat
ccgcgcgcctgcccgacctgcggagcgggccagctctcgctcaagctcggcaagttcggc
gccttcatcggctgctcgaattacccggaatgcaagtacacccgccagctctcggcctcc
ggcgtcgagggcgaaggtgacggctcctcggccgagggcggccagcccggcgtgcgcgtg
ctcggcgacgatccggccaccggcctgcccgtaaccctgcgcgacggccgcttcgggccg
ttcgtgcagctcggcgaggcgagtgcggagaagggcgcggagaagcccaagcgctcctcg
ttgcccaagggcacgacgccgggcagcgtgacgttggagatcgcgctgcgcctgctgtcg
ctgccgcgcgaggtggccaagcatccggagaccggcgagccgatcctggccaatctcggc
cgcttcggcccctacgtgcagcacgggaaaacctacgccaatctcggcaaggacgacgac
gtgctggagatcggcgccaaccgcgccatcgacctcatcgtcgccaaggagcagggtggc
ggacgcggtcgcccctcctccgatcccggccgcacgctcggccagcatccggacggcgcc
gccctcgtggtcaaggccggcaagtacggcccctatgtcagcgacggctcggtcaacgcg
acgctgccgaagacgatggccgccgagagcctgacgctggagcaggcgatcgacctcgtc
aacgccaagcgcgcttcgggcggcggcaagaagccggtccgcaagacggcttcccgcgcc
cgcgcgccggcgaagaaggcggaagccggcgaggcgaagaagccggccgtgcgcaagacc
gcagcaaagccggcggccaaggcgacggcgacgaaggccgcggccaagccggcggctgcc
aagaaggcgacggcgaagacgaaggcgggctga
DBGET
integrated database retrieval system
