Methylorubrum sp. GM97: MSPGM_35830
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Entry
MSPGM_35830 CDS
T10720
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
metq Methylorubrum sp. GM97
Pathway
metq00020
Citrate cycle (TCA cycle)
metq00190
Oxidative phosphorylation
metq00650
Butanoate metabolism
metq00720
Other carbon fixation pathways
metq01100
Metabolic pathways
metq01110
Biosynthesis of secondary metabolites
metq01120
Microbial metabolism in diverse environments
metq01200
Carbon metabolism
Module
metq_M00009
Citrate cycle (TCA cycle, Krebs cycle)
metq_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
metq_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
metq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
MSPGM_35830 (sdhB)
00650 Butanoate metabolism
MSPGM_35830 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
MSPGM_35830 (sdhB)
00720 Other carbon fixation pathways
MSPGM_35830 (sdhB)
Enzymes [BR:
metq01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
MSPGM_35830 (sdhB)
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_17
Fer4_8
Fer4_10
Fer2
Motif
Other DBs
NCBI-ProteinID:
BDL40993
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Position
3865345..3866169
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AA seq
274 aa
AA seq
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MAQFNLPKNSQVTEGKSWPAPDGAKNLQVFRIYRWNPDDGKNPRIDTYRVDRDDCGPMVL
DALLWIKNKVDPTLVFRRSCREGICGSCAMNIEGQNALACTMGIDECKTPDNALPFLTRK
DKDGAVRIYPLPHMPVLKDLVPDLTNFYAQHASIEPWLQTETPAPEKEWKQTPEDRARLD
GLYECILCACCTTSCPSYWWNGDKFLGPAALLQAYRWLIDSRDENTGERLDGLHDPFRLY
RCHTIMNCANTCPKNLNPAKAIAEIKKMMVEREV
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggcccagttcaaccttcccaagaattcgcaggtcaccgaaggcaagtcctggcctgcg
ccggacggcgccaagaacctccaagtgttccggatctatcgctggaacccggatgacggg
aagaacccgcgcatcgacacctatagggtcgatcgcgacgattgcggcccgatggtcctc
gacgccctgctgtggatcaagaacaaggtcgatccgacgctggtcttccgccgctcctgc
cgcgagggcatctgcggctcctgcgccatgaacatcgaggggcagaacgcgctcgcctgc
accatgggcatcgacgagtgcaagacccccgacaacgccctgccgttcctgacccgcaag
gacaaggacggtgcggtgcggatctacccgctgccgcacatgccggtcctgaaggacctc
gtgccggatctgaccaacttctacgcgcagcacgcgtcgatcgagccctggctccagacc
gagacgcccgcgcccgagaaggagtggaagcagacgcccgaggatcgcgcccggctcgac
ggcctctacgagtgcatcctgtgcgcctgctgcaccacgagctgcccgagctactggtgg
aacggcgacaagttcctcggcccggccgccctgcttcaggcctatcgctggctgatcgac
agccgcgacgagaacaccggtgagcgcctcgacgggctgcacgatccgttccggctctac
cgctgccacacgatcatgaactgcgccaacacctgcccgaagaacctcaatccggccaag
gcgatcgccgagatcaagaagatgatggtcgaacgcgaagtctga
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