Methylorubrum sp. GM97: MSPGM_45300
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Entry
MSPGM_45300 CDS
T10720
Name
(GenBank) hypothetical protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
metq Methylorubrum sp. GM97
Brite
KEGG Orthology (KO) [BR:
metq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metq03400
]
MSPGM_45300
DNA repair and recombination proteins [BR:
metq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
MSPGM_45300
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
FtsK_SpoIIIE
AAA_22
ResIII
AAA_30
AAA_10
AAA_16
AAA_25
T2SSE
TrwB_AAD_bind
Hydrolase
AAA_7
BD-FAE
Motif
Other DBs
NCBI-ProteinID:
BDL41940
LinkDB
All DBs
Position
complement(4914549..4916114)
Genome browser
AA seq
521 aa
AA seq
DB search
MTAGEGTILVGRSTGPRPKPEVLSLRLANRHGLVAGATGTGKTVTLQVLAEGFSNAGVPV
FAADIKGDLSGLAAAGEAKPHFVKRAEELGISYEPDRFPTVFWDVFGEQGHPIRCTVTEM
GPLLLARLLELNDIQEGVLNIAFRVADENQWPLIDLKDLRALLTFLSENAKELSATYGNV
SSASIGAIQRALLVLENQGADQFLGEPALNLEDFMRTDREGRGFVNILAADKLMQRPRLY
ASFLLWMLSELFEQLPEVGDLDKPKLVFFFDEAHLLFNDAPKALLDAVEQVVRLIRSKGV
GVYFVTQNPLDVPETVLGQLGNRVQHALRAFTPRDQRAVRAAAETFRQNPGFDVGKAITE
LAVGEALVSFLEAKGTPSVVERALIAPPQGRVGPLTPAERAAIIGQSPLRGKYDEAIDNE
SAYEMLAQRKHLDSAPAEAAGQSEGGLSGMLGGWLGGIFGSGEEAALKGKGAGKGTGRTR
RPPPSLAEQVIGNAARSMARKVGTEVGDAILRNVLGGLTKR
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgggcgaggggacgattctggtcggccggagcacggggccgcgaccgaagccc
gaggtgctgagcctgcggctggccaaccgccacggcctcgtggcgggcgccaccggcacc
ggcaagaccgtgacgctgcaggtgctggcggagggcttttccaacgcgggcgtcccggtc
ttcgccgccgacatcaagggcgatctttccggattggcggccgcgggcgaggccaagccg
catttcgtcaagcgggcggaagaactcgggatctcttacgagcccgaccgcttcccgacg
gtgttctgggacgtgttcggcgagcagggccacccgatccgctgcaccgtcaccgagatg
ggtccgctcctgctcgcccgcctgctcgaactcaacgacatccaagagggtgtgctcaac
attgccttccgcgtcgccgacgagaaccagtggccgctgatcgacctgaaggatctgcgc
gcgctcctcaccttcctgtcggagaacgccaaggagctgtcggccacctacggcaacgtc
tcgagcgcctcgatcggcgcgatccagcgggcgctgctcgtgctggagaaccagggcgcc
gaccaattcctcggcgagccggcgctgaacctcgaagacttcatgcggaccgaccgggag
ggccgaggcttcgtcaacatcctggccgccgacaagctgatgcagcggccgcgcctctac
gcctcgttcctgctgtggatgctctccgagctgttcgagcagcttcccgaggtcggcgac
ctcgacaagcccaagctcgtgttctttttcgacgaggcgcacctgctgttcaacgacgcg
ccgaaggcccttctcgacgcggtggagcaggtggtgcgcctgattcgctcgaagggcgtc
ggcgtctacttcgtgacgcagaacccgctcgacgtgccggagacggtgctcggccagctc
ggcaaccgggtgcagcacgcgctgcgcgctttcaccccgcgcgaccagcgcgccgtgcgc
gccgccgccgagaccttccgccagaaccccggcttcgatgtcggcaaggcgatcaccgaa
ctcgccgtcggcgaggcgctggtgagttttctggaagccaagggcacgccctcggtcgtg
gaacgggcgctgatcgccccgccgcaggggcgggtggggccgctgacgccggccgagcgc
gccgcgatcatcgggcagagtcccctgcgcggaaaatacgacgaggcgatcgacaacgag
agcgcctacgagatgctggcccagcgcaagcacctcgattccgccccggcggaggccgcg
ggccagagcgaaggcggcctctcgggcatgctcggcggctggctcggtgggatcttcggc
agcggcgaggaagcggcattgaagggcaaaggggctggcaagggaaccggccgcacccgc
cgcccgccgccgagtctggccgagcaggtcatcggcaacgccgcccgctccatggcgcgc
aaggtcggcacggaggtgggcgacgcgatcctgcggaatgtgctgggcgggctgacgaag
cggtag
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