Methyloversatilis sp. RAC08: BSY238_2616
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Entry
BSY238_2616 CDS
T04449
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
metr
Methyloversatilis sp. RAC08
Pathway
metr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
metr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BSY238_2616 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
metr03021
]
BSY238_2616 (rho)
03019 Messenger RNA biogenesis [BR:
metr03019
]
BSY238_2616 (rho)
Transcription machinery [BR:
metr03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BSY238_2616 (rho)
Messenger RNA biogenesis [BR:
metr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BSY238_2616 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
OB_RNB
NACHT
AAA
S1CSD-TOTE-2
AAA_5
ResIII
Fungal_virus_P2_C
Mor
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AOF83209
LinkDB
All DBs
Position
complement(2817221..2818480)
Genome browser
AA seq
419 aa
AA seq
DB search
MHLSELKALHVSQLLEMAQSFEIEGANRLRKQELVFAILRNRAKKGESIFGDGALEVLPD
GFGFLRSPEASYLAGTDDIYVSPSQIRRFNLHTGDTIEGEIRTPKDGERYFALVKVDRVN
SEPPEATKHKILFENLTPLHPTETLVLERDMRGEENTTSRVIDMIAPIGKGQRGLLVAPP
KTGKTVMMQHIAHAITANHPEAMLIVLLIDERPEEVTEMQRSVKGEVVASTFDEPATRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVQPASGKVLTGGVDANALQKPKRF
FGAARNVEEGGSLTIIATALIETGSRMDDVIYEEFKGTGNMEIHLDRRMAEKRVYPAINV
NRSGTRREELLLKPEILQKIWILRKLLYNMDDLEAIEFLLDKIKATKSNGEFFDAMRRG
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgcatctttccgaactgaaagcacttcacgtcagccaattgctcgaaatggcccagtcc
ttcgagatcgaaggcgcgaaccggctgcgaaaacaggaactggtcttcgccatcctgcgc
aaccgcgcgaaaaagggcgaaagcattttcggtgacggcgcgcttgaagtgctgcccgac
ggtttcggcttcctgcgctcgccggaagcgagctacctggccggcaccgacgacatttac
gtttcgcccagccagatcaggcgcttcaatctgcataccggcgacaccatcgaaggcgaa
atcaggacaccgaaggacggcgaacgctacttcgcgctggtcaaggtcgatcgcgtcaac
agcgaaccgccggaagcgaccaagcacaagatcctgttcgagaacctgacgccgctgcac
ccgaccgagacgctggtgctcgagcgcgacatgcgcggcgaggaaaacacgacctcgcgc
gtgatcgacatgatcgcgccgatcggcaagggccagcgcggcctgctggtcgcaccgccg
aagaccggcaagacggtgatgatgcagcacattgcgcacgccatcaccgccaaccacccg
gaagccatgctcatcgtgctgctgatcgacgagcggccggaagaagtgaccgaaatgcag
cgttcggtgaagggcgaagtggttgcctcgaccttcgacgaaccggccacccgccatgtg
caggtcgccgaaatggtgatcgagaaggcgaagcgcctggtcgagcacaagaaggacgtg
atcatcctgctcgactcgatcacccgtctggcgcgcgcctacaacaccgtgcaaccggcg
tccggcaaggtgctcaccggtggtgtggacgccaatgcgctgcagaagccgaagcgtttc
ttcggcgccgcgcgcaacgtcgaggaaggcggcagcctgaccatcatcgccaccgcgctg
atcgaaaccggcagccgcatggacgacgtgatctacgaggaattcaagggcaccggcaac
atggaaatccatcttgaccggcgcatggcggaaaagcgcgtctatccggcgatcaacgtg
aaccgctcgggcacgcgccgcgaagaactgctgctgaagccggaaatcctgcagaagatc
tggatcctgcgcaaactgctgtacaacatggacgatctggaagcgatcgaattcctgctc
gacaagatcaaggcgacgaagagcaacggagagttcttcgacgccatgcgtcgaggctga
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