Methyloversatilis sp. RAC08: BSY238_2619
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Entry
BSY238_2619 CDS
T04449
Name
(GenBank) PD-(D/E)XK nuclease superfamily protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
metr
Methyloversatilis sp. RAC08
Brite
KEGG Orthology (KO) [BR:
metr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metr03400
]
BSY238_2619
Enzymes [BR:
metr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BSY238_2619
DNA repair and recombination proteins [BR:
metr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BSY238_2619
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AOF81280
UniProt:
A0A1B3LK99
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Position
2819784..2822441
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AA seq
885 aa
AA seq
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MSTAGFETLCLPADAALFARLARLLIDRHGDALADCDLLLPVMAHAPVLRGALLAEAGHA
LFMPRMLTPALLAARWQGDAPVDPHPRRLLHLVAQLRQQTWLGDVDPWSAAQELLELADA
LAALPAPPDENALQQGFERAHGLADSAALSLEARLVHAVWHSDCTGTPGHARAVTQALMR
AAGAARRPLIHLSARVEPAPAWLELHAARVPVLNVLATRALTDTPVARVLHAAWPPVSPP
VLTHAPSRDDALELAGRVRLVGAQSLEQEAQCAASCIAGWLSEGRRNIALVALDREAARR
TRALLERRQVLLADETGWKLSTTRAAATVDALLQCFASDGYHRDLLDLLHSPHVAGSLDR
DDHAQAIAAIDDWVVRRNHVDGLHALLTDAGREFAGCPAGRLIDALSRAFALMPTHNAPA
SFRVERLLAALDALGARAALAQDAAGAQVVNLLEQLRADSSGVALDLSFADWRKWLNSEF
EQALFRDSAIDSPVVLTPLAATRLRRFDAVYVIGADSRHLAPVRLRGVLGHEGLRRELGL
PDSQVAAGQLRDDLAGLIACSDQTVFSWQTQRNGEANLPGVDLQRLDLVLQRAGLPSAIC
SAPSLADPPPLPELVVSSAPVLDPARVPSRLTASGLADLMACPYRYYARHVLGLGAGDEV
EDAMGKGSVGELVHRVLHDFHVAHPRLADAAPPALADALRAQIAAAFDGAIARNFQEHAW
ADRLHDRADAYIAWAVQRESDGWLFDSGEARRAHVLELPDGAALSLEGRIDRIDRNAEGD
VALLDYKLRSAERVRKTLQADDVQLAFYTVLEGGAVSEAAYLALEEDVPVAFIQDDPPAA
AQALLSLVSELFPALRNGASLPAHGDEAACLHCDMRGLCRKDWLA
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggcgggctttgaaaccctgtgcctgccggccgacgccgcactgttcgcccgg
cttgcgcgcctgctgatcgatcgccatggcgatgcgctcgccgattgtgacctgctgcta
cccgtcatggcgcatgcgccggtgctgcgtggtgcgctgctggctgaagccggacacgcg
ctgttcatgccgcgcatgctcacgccggctctgctggctgcgcgctggcagggcgatgca
ccggtcgatccccacccccgccgtctgctgcatctggtggcgcaactgcgccagcagacc
tggctgggcgacgtcgatccgtggtcggccgcgcaggaactgctcgaactggccgacgcg
ctggccgcattgccggcgccgccggacgaaaatgccctgcagcagggtttcgaacgcgcc
cacgggctggccgacagcgctgcattgtcgctggaggcgcgtctggtgcatgcggtatgg
cacagcgactgcaccggaacgcccggtcatgcgcgcgccgtcacgcaggccttgatgcgc
gcagcaggggcagcgcgccgtccgctcatccatctttccgcacgggtcgagccagcgcca
gcgtggctcgaattgcacgctgcgcgcgtgccggtgctgaatgtcctggcaacccgcgcg
ctgaccgacacaccggtggcccgcgtgcttcacgccgcctggccacccgtttcgccaccc
gtgctgacgcacgccccatccagagacgatgcgctcgaattggctggccgcgtgcgcctc
gtcggtgcgcagtcgctcgaacaggaagcgcaatgtgccgcgtcctgcattgccggctgg
ctgtctgaaggccgccgcaacatcgcgctggtggcactcgaccgcgaggcagcgcgtcgc
acccgcgcgctgctggaacgccggcaggtgttgctggccgatgaaaccggctggaagctg
tcgaccacgcgcgcggcggccacggtcgatgccctgctgcaatgcttcgcgtccgacggc
tatcaccgcgacctgctcgatctgctgcactcgccgcacgtggcaggctcgctcgaccgc
gatgaccacgcacaggcgattgcggccatcgacgactgggtggtcaggcgcaaccacgtc
gatggcctgcacgccttgctcaccgatgccggccgcgaatttgccggctgtccggcgggc
cggttgatcgacgcgctgtcgcgggcctttgcgctgatgcccacccacaacgcacccgcc
agcttccgggtcgagcgcctgctggcagcgctcgatgcgctgggcgcacgcgctgcactg
gcgcaggacgcagccggcgcgcaggtggtcaatctgctggagcaactgcgtgccgacagc
agcggcgtggcactcgacctgtccttcgcggactggcgcaagtggctcaacagcgagttc
gagcaggcgttgttccgcgacagcgccatcgacagcccggtggtactgaccccgctggcg
gcgacccggctccgtcgtttcgacgccgtgtacgtaatcggtgccgacagccggcacctc
gcgccggtgcgcctgcgcggcgtgctcggccacgagggccttcggcgcgaacttggactg
cctgattcgcaggtcgccgccgggcagctgcgcgacgatctcgccggtctgatcgcctgc
agcgaccagaccgtattcagctggcagacacaacgcaacggtgaagcgaacctgcccggc
gtggatctgcagcgcctcgatctggtattgcagcgcgccggcctgccgtcggccatttgc
agcgcgccgtcgctggccgatccgccgccgcttccggaactggtggtctccagtgcgccg
gtgctcgatccggcgcgcgtgccgtcgcggctgacggcaagcggtctggccgacctgatg
gcctgtccctatcgctactacgcgcgccacgtactcggcctcggcgctggcgacgaagtc
gaggacgccatgggcaagggcagcgtcggcgagctggtgcatcgcgtgctgcacgacttt
cacgtcgctcacccccggctggccgacgctgcgccacctgcactggccgacgccttgcgc
gcgcagatcgcggctgccttcgacggcgccattgcgcgcaattttcaggaacatgcgtgg
gcggatcgcctgcacgatcgcgccgacgcctacatcgcgtgggccgtgcagcgcgagtcc
gacggctggctgttcgacagcggtgaggccaggcgcgcgcatgtgctcgaattgccggat
ggggctgcgctgtcgctcgaaggccgcatcgaccgcatcgaccgcaatgcagagggcgat
gtcgcgctgctcgactacaagctgcgcagcgccgaacgcgtccgcaagaccctgcaggcc
gatgacgtgcaactggcgttctacaccgtgcttgaaggcggcgcagtgagcgaggcggcc
tatctggcgctggaagaggatgtgccggtcgcgttcatccaggacgatccgccagcggcc
gcgcaggcgctgctgtcgctggtgtccgaactgttcccggcgctgcgcaacggcgccagc
ctgccggcccacggcgacgaagcggcctgcctgcattgcgacatgcgcggcctgtgccgc
aaggactggctggcatga
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