Methyloversatilis sp. RAC08: BSY238_332
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Entry
BSY238_332 CDS
T04449
Symbol
holB
Name
(GenBank) DNA polymerase III, delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
metr
Methyloversatilis sp. RAC08
Pathway
metr03030
DNA replication
metr03430
Mismatch repair
metr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
metr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BSY238_332 (holB)
03430 Mismatch repair
BSY238_332 (holB)
03440 Homologous recombination
BSY238_332 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
metr03032
]
BSY238_332 (holB)
03400 DNA repair and recombination proteins [BR:
metr03400
]
BSY238_332 (holB)
Enzymes [BR:
metr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BSY238_332 (holB)
DNA replication proteins [BR:
metr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BSY238_332 (holB)
DNA repair and recombination proteins [BR:
metr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BSY238_332 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA_16
AAA
AAA_5
Sigma54_activat
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AOF81606
UniProt:
A0A1B3LL63
LinkDB
All DBs
Position
complement(346822..347874)
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AA seq
350 aa
AA seq
DB search
MIHDWLKPQWNQVLAGTDRMPHALLLAGPSGVGKREFAEALAARMLCERARGTQTACGAC
ASCVLITSGNHPDLLTVRPEALDEEAGEADDTEDGEGGKAKSKLIRIAQVRAVIERLGVG
SHQGGYRVVVLYPAEAMLSESANSLLKVLEEPPVNTLFLLISDHPRNLLPTIRSRTRLLP
FHLPPIEQSMAWLKAQGIAQAADALALCAGAPLHARDLAASKEAQIQSQFVDDVSRHAID
APLEVAARWAGWLQGRKKGEPGLTDLPTLVTWLQRWMADLVMQSTAGAPRVFVARQAALQ
ALAQRSDVATVLRGYNELLKVRALAHHPLNARLFVEDMLLRYARLFRAAR
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgattcatgattggttgaagccacagtggaaccaggtgctcgccggcacggaccgcatg
ccgcacgcgttgctgctggccggtccgtccggtgtcggcaagcgcgaattcgcggaggcg
ctggcggcgcgcatgctgtgcgaacgcgcccgcggcacgcaaaccgcctgcggagcgtgt
gcgtcctgtgtgctgatcacgagcggcaatcaccccgacctgctgacggtgcgcccggag
gcgctcgacgaggaagcgggcgaggctgacgacacagaggacggcgaaggcggcaaggcg
aagtcgaaactgatccgcatcgctcaggttcgagccgtcatcgaacgacttggcgtggga
tcgcaccagggtggctaccgcgtggtcgtgctgtatccggctgaagccatgctgtccgag
tccgccaattcacttcttaaagtacttgaagagcctcctgtaaatacattgtttttattg
atttcagaccacccaagaaatctgttgccgacgatacgcagccgcacccggctgttgccc
tttcacctgccgccgatcgaacagtcgatggcctggctcaaggctcagggcatcgcgcag
gcggccgatgcgctggcgctgtgcgccggggcgccgctgcatgcacgtgatctcgccgca
tcaaaagaggctcagattcagagccagtttgtcgatgatgtatcgaggcacgcaatcgat
gcaccgctggaagtggcggcgcgctgggccggctggctgcagggccgcaagaagggtgag
cccgggctgaccgacctgccgacgctggtgacctggctgcagcgctggatggccgatctg
gtcatgcaatcgacggccggcgcaccgcgcgtgttcgtggcgcgtcaggcggcgttgcag
gcgcttgcacaacgcagcgatgtcgcgaccgtgctgcgtgggtacaatgaattgctgaag
gtccgggcgctcgcgcatcacccgctgaatgcccggctcttcgtggaagacatgctgctg
cgttacgccagactgttccgggcggcacgctga
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