Methyloversatilis sp. RAC08: BSY238_3564
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Entry
BSY238_3564 CDS
T04449
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
metr
Methyloversatilis sp. RAC08
Pathway
metr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
metr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BSY238_3564 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
metr03019
]
BSY238_3564 (pnp)
03016 Transfer RNA biogenesis [BR:
metr03016
]
BSY238_3564 (pnp)
Enzymes [BR:
metr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BSY238_3564 (pnp)
Messenger RNA biogenesis [BR:
metr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BSY238_3564 (pnp)
Transfer RNA biogenesis [BR:
metr03016
]
Prokaryotic type
tRNA degradation factors
BSY238_3564 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
OB_RRP5_4th
S1_RRP5
KH_2
KH-I_KHDC4-BBP
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
AOF83471
LinkDB
All DBs
Position
complement(3887635..3889749)
Genome browser
AA seq
704 aa
AA seq
DB search
MLNATRKEFMFGNQKVVLETGEVARQAGGAVMVSIDETVVLATVVASKTAKPGQDFFPLT
VDYAEKFYAAGRIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFYNEVQVIVQVLSL
NPEVDSDIPALIGTSAALSISGIPFSGPIGAARVGYANGQYILNPTATELKTSELNLVVA
GTEAAVLMVESEAMQLSEEIMLGAVVFGHEQMQAAINAINELVEVAGKPEWDWQAPARDE
ALWNNIVGLAEAKLQEAYRITQKQTRSQRVNELRSEVVAALTADAANAPDVNTIKNYFFD
IEARIVRSRILNGEPRIDGRDTRTVRPIYIRNSVLPRTHGSALFTRGETQALVIATLGTG
RDEQIIDALGGEYRDRFMLHYNMPPFATGEAGRFGTPKRREIGHGRLAKRALLAVLPPAD
EFSYSMRVVSEITESNGSSSMASVCGGSLALMDAGVPLKAHVAGIAMGLIKDGNRFAVLT
DILGDEDHLGDMDFKVAGTDNGITALQMDIKIQGITKEIMQVALAQAHEARKHILGIMQE
SMSGAREGVSTYAPRLLTMKINPEKIRDVIGKGGAVIRALTEETGATIDIGDDGTITIAS
VSAEAAENAKRRIEAITAEVEVGKVYDGTVLRLLDFGAIVSVLPGKDGLLHISQIANERI
ANVADHLKEGQQVKVKVLETDEKGRIRLSMKALLAAPEATDQPE
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
ttgcttaacgctacccgcaaggaattcatgttcggcaaccagaaggttgtgctggagacc
ggtgaggtcgcccgccaggccggtggtgccgtcatggtgagcatcgacgaaaccgtggtg
ctcgccaccgtcgtggcctcgaagacggccaagccggggcaggacttctttccgctcacc
gtcgattacgctgaaaagttctacgcagccggtcgcattccgggtggcttcttcaagcgc
gaaggtcgtcctagcgaaaaggaaacgctgacgtcgcgcctgatcgatcgcccgatccgt
ccgctgttcccggaaggcttctacaacgaagtgcaggtcatcgtgcaggtgctgtcgctg
aatccggaagtcgattccgacattcccgcactcatcggcacgtcggcagcgctgtcgatt
tccggcattccgttcagcggcccgatcggcgctgcgcgcgtgggttacgcgaacggccag
tacatcctgaatccgacggccaccgagctgaagaccagcgaactgaatctggtcgtcgca
ggcaccgaagccgccgtgctgatggtggaatcggaagcgatgcagctgtcggaagaaatc
atgctgggcgccgtcgtgttcggacacgaacagatgcaggccgcgatcaatgcgatcaac
gaactggtcgaagtcgccggcaagcccgagtgggactggcaggccccggcgcgcgacgaa
gcgctgtggaacaacattgtcggtctggccgaagccaagctgcaggaagcctaccgcatc
acgcagaagcagacccgcagccagcgcgtgaacgagcttcgcagcgaagtcgtggctgca
ctgaccgccgacgcggccaacgcgccggacgtgaacaccatcaagaattactttttcgac
atcgaagcccgcatcgtccgcagccgcatcctgaacggcgagccgcgcatcgacggtcgc
gacacgcgcaccgtgcgtccgatctacatccgcaacagcgtgctgccgcgcacccacggt
tcggcgctgttcacgcgcggcgaaacgcaggcgctggtcatcgccacgctgggcaccggc
cgtgacgagcagatcatcgacgcactgggcggcgagtatcgcgaccgcttcatgctccac
tacaacatgccgccgttcgccaccggcgaagccggtcgtttcggcacgccgaagcgtcgc
gaaatcggccacggccgtctggccaagcgcgcgctgctcgcagtgctgccgccggccgac
gaattcagctactcgatgcgcgtggtgtcggaaatcaccgaatcaaacggttcgtcgtca
atggcttccgtctgcggcggttcgctcgcactgatggacgccggtgttccgctgaaggca
cacgtggccggcatcgccatgggcctgatcaaggacggcaaccgctttgcggtgctgacc
gacatcctcggcgacgaagatcacctgggcgacatggatttcaaggtggcgggtaccgac
aacggcatcaccgcgctgcagatggacatcaagatccagggcatcacgaaggaaatcatg
caggtcgcgctggcgcaggcgcacgaggcacgcaagcacatcctcggcatcatgcaggaa
tcgatgagcggcgcccgtgaaggcgtgtcgacctatgcaccgcgcctgctgacgatgaag
atcaatccggagaagatccgcgacgtgatcggcaagggcggcgcagtcatccgtgcgctg
accgaagaaaccggcgcgacgatcgacatcggcgacgacggcacgatcaccatcgcgtcg
gtcagcgccgaagccgccgagaacgccaagcgccgcatcgaggcgatcaccgccgaagtc
gaagtgggcaaggtgtatgacggtacggtgctgcgtctgctcgatttcggtgccatcgtc
agcgtgctgccgggcaaggacggtctgctgcacatttcccagatcgccaacgagcgcatc
gccaacgtcgccgaccacctgaaggaaggtcagcaggtgaaggtgaaggtgctggaaacc
gacgaaaagggccgcatccgcctgtcgatgaaggcgctgctcgctgcgccggaagcgacc
gaccagccagagtga
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