Methylobacterium durans: DK389_01255
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Entry
DK389_01255 CDS
T05724
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mets
Methylobacterium durans
Pathway
mets03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mets00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DK389_01255 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mets03019
]
DK389_01255 (recQ)
03400 DNA repair and recombination proteins [BR:
mets03400
]
DK389_01255 (recQ)
Enzymes [BR:
mets01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DK389_01255 (recQ)
Messenger RNA biogenesis [BR:
mets03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DK389_01255 (recQ)
DNA repair and recombination proteins [BR:
mets03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DK389_01255 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
AWN39424
UniProt:
A0A2U8W033
LinkDB
All DBs
Position
complement(290245..292098)
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AA seq
617 aa
AA seq
DB search
MTQRLDEARAALRATFGYDDFRPGQAEVIGAVLDGSDVFAVMPTGSGKSMTYQLPALVAN
DLTVVVSPLIALMHDQVQQMLAFGVEAATLNSTVPEAQSRETWRKIRSGDLRLLFVSPER
LLMDGCMEALRGAGVRRLAVDEAHCVSQWGHDFRPEYRDIARAREALGNVQVLALTATAD
AATRTDIAERLFPAGREAKTFVHSFDRPNIRLTFAPKDNPTRQIERFLRHRRQESGIIYC
SSRKRTEQLAESLARDGFTALPYHAGLDQGTRMRNQDRFLQEDGVVMTATVAFGMGINKP
DVRFVCHADMPSNVEGYYQEIGRAGRDGLPADTLTIYGLDDMALRRRQIDEKEIPDERRR
VERRKLEAMIALCEGATCRRQSLLAYFGETSGACGRCDLCRGGVTLVDGTVSAQKVLSAI
VRTGQRFGAAYICDVVGGKESEPIRRNGHTQLKTFGVGSDKPVAAWRAILRQLFAAGAVA
ENGDGFGGLSMTEKGEAILFGREPIQLRPDPEPKAAEPRERRRTAARDDEALALSEADEA
LFQHLRGLRATIARGEGIAAFMVFPDRTLIEMARQKPVDLWALRSVHGVGERKREAYGER
FVAAIADFLAQPQAERA
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgacccaacgcctcgacgaggcccgcgccgcgcttcgagccaccttcggctacgacgat
ttccggcccgggcaggccgaggtgatcggggccgtgctcgacgggtcggacgtgttcgcc
gtgatgccgacgggttccggcaagtcgatgacctaccagctgccggcactcgtcgcgaac
gatcttaccgtggtcgtctcgccgttgatcgcgctcatgcacgatcaggtgcagcagatg
ctcgccttcggtgtggaggccgcgacgctcaactccaccgtaccggaggcgcagtcccgc
gagacttggcgcaagatccgctccggcgacctgcgcctcctgttcgtctcgcccgagcgg
ctcctcatggacggctgcatggaggcgctgcggggggcgggcgtgcggcggctcgcggtc
gacgaggcgcattgcgtctcgcaatgggggcacgatttccggcccgagtaccgcgacatc
gcccgtgcccgcgaggcgctcggcaacgtgcaggtgctggcgctcaccgccacggccgac
gcggcgacgcgcaccgacatcgccgagcggctgttccccgcgggccgcgaggcgaagacc
ttcgtccattccttcgaccggccgaacatccggctcacctttgcgccgaaggacaacccg
acccgccagatcgagcgcttcctgcgccaccggcgccaggagagcgggatcatctactgc
tcgtcccgcaagcgcacggagcagctcgcggagtcgctggccagggacggcttcaccgcg
ctgccctaccacgcgggcctcgaccaaggcacgcgcatgcgcaaccaggaccggttcctg
caggaggacggcgtcgtcatgacggcgaccgtcgccttcggcatgggcatcaacaagccg
gacgtgcgcttcgtctgccacgccgacatgccctcgaacgtcgagggctactatcaggag
atcggccgcgccgggcgcgacgggctgccggccgacacgctgaccatctacggcctcgac
gacatggcgctccgccgccgccagatcgacgagaaggagatcccggacgagcgccgccgg
gtcgagcgccgcaagctcgaggcgatgatcgcgctgtgcgagggcgccacctgccggcgg
caatcgctgctcgcctatttcggcgagacgagcggcgcttgcggccgctgcgacctctgc
cgcggcggcgtcaccctcgtcgacggcacggtctcggcccagaaggtgctctcggccatc
gtgcgcaccggccagcgcttcggggccgcctatatctgcgacgtggtgggcggcaaggaa
tccgagccgatccgccgcaacggccacacgcagctcaagaccttcggggtcggctccgac
aagccggtcgcggcctggcgcgccatcctgcgccaactcttcgccgccggcgcggtcgcc
gagaacggcgacggcttcggcggactctcgatgaccgagaagggcgaggcgatcctgttc
gggcgcgagccgatccagctccggccggacccggagccgaaggcggccgagccccgcgag
cgccgccgcacggctgcccgcgacgacgaggccctggcgctcagcgaggcggacgaggcc
ctgttccagcacctgcgcggcctgcgcgcgacgatcgcgcgcggggagggcattgccgcc
ttcatggtctttcctgaccggacgctgatcgagatggcacgccagaaacccgtggacctc
tgggcgctccgctcggtgcacggcgtcggcgagcgcaagcgcgaggcgtacggcgagcgc
ttcgtcgccgcgatcgcggacttcctcgcgcagccgcaggcggagcgggcctga
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