Methylobacterium durans: DK389_10535
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Entry
DK389_10535 CDS
T05724
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mets
Methylobacterium durans
Brite
KEGG Orthology (KO) [BR:
mets00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mets03032
]
DK389_10535
03400 DNA repair and recombination proteins [BR:
mets03400
]
DK389_10535
Enzymes [BR:
mets01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DK389_10535
DNA replication proteins [BR:
mets03032
]
Prokaryotic type
DNA Topoisomerases
DK389_10535
DNA repair and recombination proteins [BR:
mets03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DK389_10535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
CaMKII_AD
Motif
Other DBs
NCBI-ProteinID:
AWN40884
UniProt:
A0A2U8W456
LinkDB
All DBs
Position
complement(2303228..2304454)
Genome browser
AA seq
408 aa
AA seq
DB search
MASDGDECGGVADPREAAEEAGLRYVDDGMPGLTRRKSGKGFSYRDAKGQPVRDAKTLAR
IRSLAIPPAYTEVWICPRANGHIQATGRDAKGRKQYRYHPDFREARESSKFSHIMAFAGA
LPGIRARIDQDMRRAGLPREKVLATVVHLLESTLIRVGNDDYARANKSYGLTTLRDPHVR
IEGSDLTFRFKGKSGKTWNLSVKDRRIARIVKACQDLPGQELFQYIDEAGERRDVTSADV
NAYLREITGQDITAKDFRTWAGTVLAALALQEFETFDSQAKAKKNVRTAIESVAARLGNT
PTICRKCYIHPQILDGYLEGDLLLQIQDAVETELCEDLNRLKPEEAAVLSLLRTRLEAAK
GRPDGDDQGRAEARRPAKRASRTGRAGKGVAARARRGTAQGAGAAASA
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggacggggacgagtgcggcggggtcgccgatccgcgggaggcggccgaggag
gccggcctgcgctacgtcgacgacggcatgccgggactgacgcgccggaagagcggaaag
ggcttcagctaccgggacgccaagggccagccggtgcgcgacgcgaagaccctcgcccgc
atccgctcgctggcgattccgcccgcctacaccgaggtctggatctgcccgcgtgcgaac
ggccacatccaggccacaggccgcgacgccaaggggcgcaagcagtaccgctatcatccc
gatttccgggaggcgcgggagtcgagcaagttcagccacatcatggccttcgccggcgcg
ctgcccggcatccgggcgcgcatcgatcaggacatgcgccgcgccgggctgccgcgcgag
aaggtgctcgccaccgtggtgcatctcctggagagcaccctgatccgggtcggcaacgac
gattacgcccgcgcgaacaagagctacggcctcaccaccctgcgcgatccgcacgtgcgg
atcgagggctcggacctcaccttccgtttcaagggcaagagcggcaagacctggaacctg
tcggtgaaggaccggcgcatcgcgcgcatcgtcaaggcctgccaggatctgcccggccag
gagctcttccagtacatcgacgaggcgggcgagcggcgcgacgtcacctcggcggatgtc
aacgcgtacctgcgcgagatcacggggcaggacatcaccgccaaggatttccgcacctgg
gccggcacggtgctggcggcgctcgctctgcaggaattcgagaccttcgacagtcaggcc
aaggccaagaagaacgtccgcacggcgatcgagtcggtggccgcccgcctcggcaacacg
ccgaccatctgccgcaagtgctacatccacccgcagatcctcgacggttatctcgagggc
gacctcctcctgcagatccaggatgcggtcgagaccgagctctgcgaggatctcaaccgg
ctgaagcccgaggaggcggccgtgctgagcctgctgcgcacccgcctggaggcggcgaag
gggcgcccggacggagacgatcagggacgcgccgaggcccgcaggccggccaagcgggcg
agcaggacggggcgggccgggaagggtgttgcggcccgcgcacggcggggcacggcgcag
ggggccggagccgcggcgagcgcctga
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