Methylobacterium durans: DK389_11305
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Entry
DK389_11305 CDS
T05724
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
mets
Methylobacterium durans
Pathway
mets03030
DNA replication
mets03430
Mismatch repair
mets03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mets00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DK389_11305 (holA)
03430 Mismatch repair
DK389_11305 (holA)
03440 Homologous recombination
DK389_11305 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mets03032
]
DK389_11305 (holA)
03400 DNA repair and recombination proteins [BR:
mets03400
]
DK389_11305 (holA)
Enzymes [BR:
mets01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DK389_11305 (holA)
DNA replication proteins [BR:
mets03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DK389_11305 (holA)
DNA repair and recombination proteins [BR:
mets03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DK389_11305 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
AAA_assoc_2
BNR_assoc_N
Motif
Other DBs
NCBI-ProteinID:
AWN41004
UniProt:
A0A2U8W4H9
LinkDB
All DBs
Position
complement(2475018..2476046)
Genome browser
AA seq
342 aa
AA seq
DB search
MTAVKAGDVEGLIRRGPDPKIPVILVYGPDTGLVGERAKRLAEGAVADPDDPFALVKIDG
DALASDPGRLIDEAGTVGLFGDRRTIWVKAGSRNYAPAVEAVLKSDITGTRIVVEGGDLG
KSAPLRTLCERSARALALPCYPDDARALAELVRQTLQDRGLRIEPGARDLLVASLGGDRR
ASLSEIEKLALYASGQDTVTSDDVEAVVSDVAGSVLNTLIDAAFTGRGGEVERDYRRFRH
EGLDGSVILGAALRHALTLLATRLDGEGKAPSLMAAGWRGLHFRRRADVEAQLARWSPAA
LRQAVQILQEAVLASRRVGPDLAHAHASAALLRIAGESRRRG
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
ttgacggcggtcaaggcgggggacgtcgagggcctgatccggcgcgggcccgatccgaag
atcccggtgatcctcgtctatgggcccgataccggcctcgtcggcgagcgagcgaagcgc
ttggccgagggcgcggtcgccgatccggacgacccgttcgccctggtgaagatcgacggg
gacgccctcgcctccgatcccggccgcctgatcgacgaggccggcacggtcggcctgttc
ggggaccggcgcacgatctgggtgaaggccggcagccgcaattacgcgccggccgtcgag
gccgtcctcaagagcgacatcacgggaacccggatcgtcgtggaggggggtgatctcggc
aaatccgcgcccctgcgcaccctctgcgagcgctcggcccgggcgctcgccctgccctgc
tacccggacgacgcgcgggcgctggccgaactcgtccgccagaccctgcaggatcggggc
ctgaggatcgagcccggggcccgcgacctcctcgtggcgagcctcggcggagaccgccgc
gccagcctgtcggagatcgagaagctggcgctctacgcgtccggccaggacacggtcacg
agcgacgatgtcgaggccgtggtgagcgacgtcgccggcagcgtgctcaacaccctgatc
gacgccgccttcaccgggcgcggcggcgaggtcgagcgggattatcgccgcttccgccac
gaggggctcgacggctcggtgatcctcggcgcggccctgcgccatgcgctcacgctgctc
gccacgcggctcgacggcgagggcaaagccccgagcctgatggcggcgggctggcgcggc
ctgcatttccgtaggcgggcggacgtcgaggcgcagctcgcacgctggtcgccggcggcc
cttcgccaggccgttcagatcctgcaggaggccgtgctcgcttcgcgacgggtgggcccg
gacctcgcccacgctcacgcctccgccgcgttgctgcgcatcgcgggggaatcgcggcgc
cgggggtag
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