Methylobacterium durans: DK389_12920
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Entry
DK389_12920 CDS
T05724
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
mets
Methylobacterium durans
Brite
KEGG Orthology (KO) [BR:
mets00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mets03400
]
DK389_12920 (addB)
Enzymes [BR:
mets01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DK389_12920 (addB)
DNA repair and recombination proteins [BR:
mets03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
DK389_12920 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AWN41258
UniProt:
A0A2U8W6J0
LinkDB
All DBs
Position
2807897..2811028
Genome browser
AA seq
1043 aa
AA seq
DB search
MTESRVFTIPPGASFLPALAEALIDGRLVGGLGSDPLALAAVTIYLPTRRAARALGTVLA
ERLGAAALLPRMIPLGEADEAELDLAANPLLENGPDALHPSMPPLERRLILARLVQAWAE
TVDRKLLPIDDDVPFLVPSSPSDAIGLAADLERLMDALTVEGLPWSEIGSAVEAEYSQYF
GLTLDFVRIAAENWPKILAERGLSDPVSRARRLVLAEADRLTRERPADPVVVAGSTGSVP
ATARLIAAVAGLPRGAVVLPGLDLDLDAAGWDGIETGEGFERQIAHGHPQAVLHRLLGPS
GLRLERPAVTPLGAPAPDLAARARLLSEALRPAETTDAWARIEPATRSEIASRGLADVAV
AEATDEREEALIAALALRETLERPGATAALVTPDRGLATRVAAELARWGIVAEDSAGLAL
AQSSAGRLARLAAELAADLHPARLITLLAHPLVRLGLDRDDVVRAAAALEIGVLRGPAPA
PGFEGLRRALDEARNPRDGERRPRAKRRLKPVDWELAEALVERLALAFAAFPGDDARGIC
DLVAVAGRHRETCDWLILGPDEAPEAEPDASLSCLDALFDDLELADSGLLPGRFGDYPAF
FTALARERVVPCAVAAPHPRLRILGLLEARLLSVDRVVLGGLDEGVWPMKTVTDAFLNRP
MRERVGLNPPERRIGQSAHDFVQALGCRDAVITRSGKREGAPTVPSRFLQRMRAFVGEVT
WQDALGRGRRLAAYAAAIDGGAEVPQPRLTQPKPKADPALFPRTLSVTEIETLVRDPYVI
FARHVLGLDPLEPVAALPGASERGTLIHAILGAFAQAHPEALPARAEELLFAFALNAFGP
IQDVYPELYAEWWPRYERMAAAYLPWELQRRSDLARVHPEISGKWVIPMGSETFTLRARA
DRIEWRRDGGACIVDFKTGAPPSAREVFAGFSPQLTLEAAMLMHGAFEGLPAAKATPDLL
YMYASGGRKPFHPVPVKPPRGDARPVEAIVAEHAERLRGLIARFLTGEAAYVSRPYPKYA
RAYGDYDHLARVIEWSLGGEEEG
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgactgagtcccgcgtcttcaccatcccgccgggcgcgtccttcctgccggcgctggcc
gaagccctcatcgacgggcgcctcgtcggcggcctcgggagcgatccgctggcgctcgcc
gccgtgacgatctacctgccgactcgccgcgcggcccgggcgctgggaacggtgctggct
gagcgcctcggagcggccgccctcctgccgcggatgatcccgctcggagaggccgacgag
gcggaactcgacctcgcggcgaacccgctcttggagaacgggccggacgccctccacccc
tcgatgccgccgctggagcggcgcctcatcctcgcccgcctcgtccaggcctgggccgag
accgtcgaccgcaagctcctgccgatcgacgacgacgtgcccttcctcgtgccgtcctcg
ccctcggacgcgatcggcctcgcggccgatctcgaacggctcatggacgcgctcaccgtc
gaggggctgccctggtccgagatcggcagcgccgtcgaggcggaatattcgcagtatttc
ggcctcaccctcgatttcgtgcgcatcgccgccgagaactggccgaagatcctggccgag
cgcggcctcagcgatccggtctcccgggcgcgccgcctcgtcctcgccgaggcggatcgc
ctgacgcgcgagcgcccggccgatccggtcgtcgtggcgggctcgacgggctcggtgccg
gcaaccgcccgcctgatcgcggcggtggccgggctgccccgcggcgcggtagtgctgccg
gggctcgacctcgacctcgacgcggcgggctgggacgggatcgagaccggagagggtttc
gagcggcagatcgcgcacggccacccgcaggccgtgctgcaccggctcctcggacccagc
ggcctgcgccttgagcgcccggcggtgacgcccctcggggcacctgcgccggacctcgcg
gcgcgggcgcgcctcctctcggaggccctgcgcccggccgagaccaccgatgcctgggcg
cggatcgagccggccacgcgctccgagattgcgtcccgcggcctcgcggacgtcgccgtc
gccgaggctacggacgagcgcgaggaggcgttgatcgccgcgctcgccctgcgcgagacg
ctggagagacccggtgccaccgcggccctcgtcacgccggatcgcggactcgcgacccgg
gtcgcggccgagctcgcccgctggggcatcgtggccgaggattcggcgggactcgctctc
gcgcagagctcggccggacgcctcgcccggctcgcggccgaactcgctgcggatctccat
ccggcccgcctgatcacgcttcttgcccacccgctggtccggctcggcctcgaccgcgac
gacgtggtgcgcgccgccgccgccctcgagatcggcgtgctgcgcggccccgcccccgca
ccgggcttcgagggcctgcgccgagcgctcgatgaggcgcggaacccgcgggacggcgag
cggcgcccgcgcgccaagcgccggctcaagccggtcgactgggaactcgccgaggcgctg
gtcgaacgcctggctctcgccttcgccgcgttcccgggcgacgacgcccgcggcatctgc
gacctcgtcgccgtggcgggccgccaccgggagacctgcgactggctgatcctcgggccg
gacgaggcgccggaggccgagcccgacgcctcgctgtcctgcctcgacgccctgttcgac
gatctcgaactcgccgattcgggcctcctgcccggtcgcttcggcgattatccggccttc
ttcacggcgctcgcccgcgagcgcgtggtgccctgtgccgtcgcggcgccgcatccgcgc
ctgcgcatcctcggcctcctggaggcccggctcctcagcgtcgaccgggtggtgctcggc
ggcctcgacgagggcgtctggccgatgaagacggtcaccgacgccttcctcaaccgcccg
atgcgcgagcgcgtcggtctcaacccgccggagcggcgcatcggccagagcgcccacgat
ttcgtgcaggcgctgggctgccgcgacgcggtgatcacccgctcgggcaagcgcgagggc
gcgccgaccgtgccctcgcgcttcctccagcgcatgcgcgccttcgtcggcgaggtgact
tggcaggacgcgctcgggcgtggccggcgcctcgcggcctatgccgccgccatcgacggc
ggcgccgaggtgccgcagccgcgcctgacccagccgaagccgaaggccgatccggccctg
ttcccgcgcaccttgagcgtcaccgagatcgagacactggtgcgcgacccctacgtcatc
ttcgcccgccacgtgctcggcctcgacccgctggagccggtggcggccctgccgggggcg
agcgagcgcggcaccctgatccatgcgatcctcggcgccttcgcgcaggcccatcccgag
gctctgccggcgcgggccgaggaattgctcttcgccttcgcgctgaacgccttcggcccg
atccaggacgtctatccagagctctacgcggaatggtggccccgctacgagcggatggcg
gcggcctacctgccctgggagcttcagcgccgctcggacctcgcccgcgtgcatcccgag
atctccggcaagtgggtgatcccgatgggctcggagaccttcacgctgcgcgcccgggcc
gaccggatcgagtggcgccgcgacgggggcgcctgcatcgtcgattttaagaccggggcg
ccgccgagcgcccgcgaggtcttcgcgggcttctcgccgcaattgacgctggaggccgcc
atgctgatgcatggcgccttcgagggactgccggccgcgaaggcgacgcccgacctcctc
tacatgtacgcgtccggcggccggaagcctttccatccggtgcccgtgaagcctccccgc
ggcgacgcgcgccccgtcgaggccatcgtggccgagcacgccgagcgcctgcgcggcctc
atcgcccgcttcctcacgggcgaggcggcctacgtctcgcggccctacccgaaatacgcc
cgcgcctacggcgattacgaccacctcgcccgggtgatcgaatggtcgctcggcggcgag
gaggagggctga
DBGET
integrated database retrieval system
