Methylobacterium durans: DK389_20525
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Entry
DK389_20525 CDS
T05724
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mets
Methylobacterium durans
Brite
KEGG Orthology (KO) [BR:
mets00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mets03016
]
DK389_20525 (rnd)
Enzymes [BR:
mets01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
DK389_20525 (rnd)
Transfer RNA biogenesis [BR:
mets03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
DK389_20525 (rnd)
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AWN42445
UniProt:
A0A2U8W8I5
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All DBs
Position
4473746..4474903
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AA seq
385 aa
AA seq
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MDLITTTSALADACTCLAAQPFVTVDTEFMRETTYYPKLCLIQMAGPDGSAVLVDPLAAK
IDLKPFVDLMADEGVVKVFHSARQDLEIIWMLGELLPHPFFDTQVAAMVCGYGDSVSYEQ
LVNDVAKAKIDKSSRFTDWSRRPLSDAQLAYALSDVTHLVTIYEVLAGQLVETDRGAWLD
EEMGVLTSPETYRADPAQAWRRLSGRMRKPREIAVLMEVAAWREREAQTRNVPRGRILKD
EAVIDVATSAPRSVEALGRLRSIPAGFERSRTGADILAAVERGFGRDTAEIAMPERSRGR
GGGGNGALVELLKVLLKAVCEAEGVAPKIIATVDDLEAIADDDEADVPVLHGWRRGLFGE
KALALKSGRLALSIERGRVVVREVE
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggacctgatcacgaccacgtcggccctcgccgacgcctgcacctgtctggccgcgcag
cccttcgtcactgttgacacggagttcatgcgcgagaccacctattacccgaagctctgt
ctgatccagatggcggggccggacgggagcgcggtgctggtcgacccgctggcagcgaag
atcgacctgaagccgtttgtcgacctgatggccgacgagggcgtggtgaaggtgttccac
tccgcccgccaggatctcgagatcatctggatgctgggcgaactcctgccgcacccgttc
ttcgacacgcaggtcgccgccatggtctgcggatacggcgactcggtctcctacgagcag
ctcgtcaacgacgtagccaaagccaagatcgacaagtcctcccgcttcacggactggtcg
cggcgcccgctctccgacgcgcagctcgcctatgccctgtccgacgtgacccacctcgtg
acgatctacgaggttctggcgggccagctcgtcgagacggaccggggcgcctggctcgac
gaggagatgggcgtgctgacctcgcccgagacctaccgggcggacccggcccaggcttgg
cgtcgcctgtccgggcggatgcgcaagccccgcgagatcgccgtcctgatggaggtcgcc
gcctggcgcgagcgcgaggcgcagacccgcaacgtgccgcgcgggcgcatcctcaaggac
gaggcggtgatcgacgtcgccacctcggcgccccgcagcgtcgaggcgctcggtcgcctg
cgctcgattcccgccggcttcgagcgctcccgcaccggcgccgacatcctcgccgccgtg
gagcggggatttggccgcgacaccgccgagatcgcgatgccggagcgcagccgcggccgg
ggcgggggaggcaacggcgccctcgtcgagcttctcaaggtgctcctcaaggccgtctgc
gaggcggagggcgtggcgcccaagatcatcgccacggtcgacgatctggaagcgatcgcc
gacgacgacgaggccgacgtgcccgtgctgcacggctggcgccgcggtctgttcggcgag
aaggccctcgcgctcaagagcggccgcctcgccctctcgatcgagcgcggccgggtggtc
gtgcgcgaggtggaatga
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