Methanobacterium sp. BRmetb2: CIT01_00610
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Entry
CIT01_00610 CDS
T05692
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
mett
Methanobacterium sp. BRmetb2
Pathway
mett03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mett00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CIT01_00610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mett03400
]
CIT01_00610
DNA repair and recombination proteins [BR:
mett03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CIT01_00610
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CIT01_00610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
DUF87
AAA_30
AAA_22
SWI2_SNF2
Kinesin
T2SSE
Microtub_bd
FolB
Motif
Other DBs
NCBI-ProteinID:
AXV36802
UniProt:
A0A347ACV5
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All DBs
Position
125487..127439
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AA seq
650 aa
AA seq
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MGEFKLRSNYKPLGDQPKAIKSLVNGLKKGYRDQTLLGVTGSGKTFTMANVIEKIQKPTL
VISHNKTLAAQLYEEFKEFFPDNAVEYFVSYYDYYQPEAYVPQTDTYIDKEASINDEIDQ
MRHSTTQSLLSRDDVIVVSSVSCIYGLGAPEDYGEFLLTIDVGSSIDRDEILAQLVKMQY
DRNDIDFSRGKFRVRGDVIDINPIHGSKPIRLELFGDEVDSISLIDPLKNKSTRKMERIT
IFPAKHFVTSADKMKNAIKLIEEELEDRLLVLKSQNKLVEAQRLEQRTRFDVEMLKEMGY
CQGIENYSLYMSGRKWGSMPYTLLKYFPDDYLTIIDESHVTVPQIRGMYAGDKARKDTLI
DYGFRLPSAGENRPLKFEEFDSLINQIIYVSATPADYEIGKSKNHVEQIIRPTGLVDPEV
IVRPVTNQVDDLLHEVKNRVKNNQRTLITTLTKRMAEDLTEYYAKVGVKVRYLHSEIDTL
ERIEIIDDLRRGEFDCLVGVNLLREGLDLPEVSLVGILDADKEGFLRSKTSLIQTIGRAA
RNVDGQVLVYADNITESVRSAVDITNKRRKLQMEYNKTHGIIPKNVVRSIKEKDKKEEID
IKNIGKIPKDELDILINDLENDMKDAAAQLDFETAAKIRDKILTLKGVSE
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgggagaatttaaactcagatcaaattataaaccattaggggatcaaccaaaagcaata
aaatcacttgtaaacggattaaagaagggataccgtgatcaaactcttttaggagtaact
ggttcaggtaaaactttcaccatggccaatgttattgagaaaatccagaagcctactcta
gttatttctcacaacaaaacactggctgcccagttgtacgaggaatttaaagaatttttt
ccagataatgcagttgagtactttgtaagctactacgattattatcaacctgaagcttac
gtacctcaaaccgacacctacattgacaaggaagcttctattaatgacgaaattgaccag
atgcgccattctacaacccagtctctcttatctagggacgatgtcatagttgtatccagt
gtttcctgtatctacggtttaggagcacctgaagattatggagaatttttactcactatt
gatgtgggaagcagtattgatcgggacgaaatactggcccaactggtgaagatgcagtat
gaccgaaatgatatagacttcagccgtggaaagtttagagtgagaggagatgtaattgat
attaacccaatacacggcagcaaacctattagattggagctttttggtgatgaagtagat
tctatctcccttatagatccattaaaaaataagtccacaagaaaaatggaaagaatcact
attttccctgctaagcattttgtaacatctgcagataagatgaaaaatgccattaaatta
attgaagaagaattagaagatcgtcttcttgttttaaaatcacaaaataaactggtagag
gctcaaagattggagcaaagaacccgatttgatgtggaaatgttaaaagaaatgggttac
tgccagggaattgaaaactattcactatatatgagtggacgtaaatgggggagcatgcct
tacaccctccttaaatacttccctgatgattatttgactatcattgatgaatcacacgtg
accgttcctcagatcagaggaatgtatgctggggacaaggcccggaaagatacattgatt
gattatggttttcggctgccatctgcaggtgaaaatcgtcctttaaagtttgaagaattt
gatagtttgattaatcaaattatatatgtttctgccacccccgcagactacgaaatagga
aaaagtaagaatcacgtggaacagattatccggcccactggtctggtagacccggaggtc
attgttagacctgtgactaaccaggtggatgacctcttacacgaagttaaaaatagggtg
aaaaataatcagagaacccttataaccaccttaaccaagagaatggcagaagatctgact
gaatactatgccaaggtaggagtgaaggtgagatatctccactcagaaatagatactttg
gagagaatagaaataattgatgatttaagaagaggagaatttgactgcctggtaggagta
aacctcttaagggaaggtttagacctgccggaggtttccctggttggaattcttgatgca
gacaaggaaggttttctgcgctctaaaacatcccttatacagaccattggaagagcagca
agaaatgtggacggacaggtattagtatatgcagataatatcactgaatctgtaagatca
gcagtggacataaccaacaagagacgtaagctgcagatggaatacaacaaaacccacggt
attataccgaaaaatgtggtccgttccatcaaagaaaaggataaaaaagaagaaatagat
ataaagaacattggaaagattcctaaagatgaattggatattttgataaatgatttagaa
aatgatatgaaagatgcggctgcacagctggattttgaaacagctgctaaaattagagat
aaaattctcacattaaaaggagtttcagagtaa
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