Methanobacterium sp. BRmetb2: CIT01_01685
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Entry
CIT01_01685 CDS
T05692
Name
(GenBank) phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
mett
Methanobacterium sp. BRmetb2
Brite
KEGG Orthology (KO) [BR:
mett00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mett03019
]
CIT01_01685
Messenger RNA biogenesis [BR:
mett03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CIT01_01685
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cas3_HD
HDOD
zf-RVT
SirC_C
Motif
Other DBs
NCBI-ProteinID:
AXV37004
LinkDB
All DBs
Position
complement(356515..357432)
Genome browser
AA seq
305 aa
AA seq
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MSSKSEEDFVKNLDSRRPIKSMFVISEKTLKKGKNNKFYIDLRLSDNTGEIIGRIFAENV
KETMESLDEGEVYEIEGTVNEFPRGSGQFNIIIKDFDELSDGKYDLNDFIITSDQDQYEL
IMEIKNTIDNIKDEHLKELLVCFFDDEKFTLRFYDSPSAKFYHHNYIAGLLEHTVGVLKL
CKQICEFYPDLDADLLYTGAILHDIGKLDAYQYNKYATCITLSEEGELLDHLFISCEMVN
EKLKKIEMPENVKNKLLHLILSHHGDVKNGWGSPVSPQIPEAVALHHADNLDAKVKGMLQ
NPVRK
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtaaatcagaggaagattttgttaaaaatttagattcacgaaggcctatcaaa
tccatgtttgtgatatcagaaaaaaccctgaaaaaaggtaaaaacaataaattctatata
gatttaaggctttccgataataccggtgaaatcataggaagaatttttgccgaaaatgtg
aaagaaaccatggaatccctagatgaaggcgaagtttatgaaatcgaaggaacagtaaac
gagtttccaaggggttctgggcagttcaatataataattaaagattttgatgaattatct
gatggtaaatatgatttaaatgattttatcataacctctgatcaggatcagtatgaatta
atcatggaaataaaaaacactatagataatattaaagatgaacatttaaaggagttatta
gtttgtttttttgatgatgaaaaattcacactccgattttatgattcaccatcagctaaa
ttttatcaccacaactatatagcgggactgttagaacatactgtaggagttttaaaactt
tgtaaacaaatttgtgaattttatcctgatttagatgctgatctattatacactggagct
attctccatgatataggaaaattggatgcctatcaatataataaatatgcaacctgtatt
actctgtctgaggagggtgaattactggaccacctctttatatcatgtgaaatggttaat
gagaaacttaaaaaaatagaaatgcctgaaaatgtaaaaaacaaactcctccatctgatt
ttaagccatcacggtgatgtgaaaaatggttggggttcaccagtaagtcctcaaatacct
gaggcagtggcattgcaccatgccgacaacctggatgctaaagtcaaaggcatgctgcag
aatcctgtaagaaaatag
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