Methanobacterium sp. BRmetb2: CIT01_02020
Help
Entry
CIT01_02020 CDS
T05692
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
mett
Methanobacterium sp. BRmetb2
Brite
KEGG Orthology (KO) [BR:
mett00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mett03016
]
CIT01_02020
Enzymes [BR:
mett01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CIT01_02020
Transfer RNA biogenesis [BR:
mett03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CIT01_02020
Prokaryotic type
CIT01_02020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AXV37066
UniProt:
A0A347ADL9
LinkDB
All DBs
Position
complement(420691..421509)
Genome browser
AA seq
272 aa
AA seq
DB search
MDILALKIAYLGTPFHGFQRQPGLRTVEGELIQALKKSGMIEDTRTSEFSIAGRTDSGVH
ALGNVVSFKTSNKLRINHVNSFLSDDIRILASSKVSNEFNPRFARQRHYRYLLLPDEELD
LELMKKASVRFEGTHNFQKFSKKSERNPIRKINQLRISRKNDYLIIDVYGESFLWNMVRK
IVTVLLMIGKSQLNLLELDKLFDPSFKSSKINIQPMPAPGLILMGVEYDNLNFEYNEYAK
EKFFNYLSREYLSNYTLVLAEKNMMNVLKYSD
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggacatattagctttaaagattgcctaccttggcacgcctttccatggctttcagaga
caaccgggacttagaactgtggagggagagctgatccaagcacttaaaaaatcaggaatg
attgaggatactagaacttcagaattttccattgccggaaggactgatagtggagttcat
gccttgggaaatgttgtctcctttaaaacatctaataaattaagaataaatcatgttaac
agttttttatccgacgatataagaattttggccagttctaaagtttcaaatgaatttaat
cctaggtttgctagacaaaggcattatcgttacttgttactgccggatgaagagcttgat
ttagagttaatgaaaaaagcatctgttagatttgaaggaacccataatttccaaaagttt
tcaaaaaaaagtgaaagaaatcccattcgaaaaattaaccaattaagaatatccagaaaa
aatgattatttaataatagatgtttatggtgaaagttttctctggaacatggtgcggaaa
attgtaactgtgttattgatgattggcaaaagtcaactcaatttactggaattggataaa
ttattcgatccttcctttaagtcatctaaaatcaatattcaaccaatgcctgctcctggt
ttaattcttatgggtgttgaatatgataacctaaattttgaatacaatgagtatgctaag
gaaaaattttttaattatttaagtagggagtatctctcaaattacacccttgttttggct
gaaaaaaatatgatgaatgttttaaaatattctgattaa
DBGET
integrated database retrieval system
