Methanobacterium sp. BRmetb2: CIT01_02225
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Entry
CIT01_02225 CDS
T05692
Symbol
prf1
Name
(GenBank) peptide chain release factor 1
KO
K03265
peptide chain release factor subunit 1
Organism
mett
Methanobacterium sp. BRmetb2
Pathway
mett03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mett00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CIT01_02225 (prf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mett03019
]
CIT01_02225 (prf1)
03012 Translation factors [BR:
mett03012
]
CIT01_02225 (prf1)
Messenger RNA biogenesis [BR:
mett03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
CIT01_02225 (prf1)
Translation factors [BR:
mett03012
]
Eukaryotic type
Release factors
CIT01_02225 (prf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
DUF7129
Zn_ribbon_8
Zn_ribbon_6
DUF3300
PWP3A-B_C
HypA
DpnI
Motif
Other DBs
NCBI-ProteinID:
AXV37102
UniProt:
A0A347ADQ5
LinkDB
All DBs
Position
complement(464412..465641)
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AA seq
409 aa
AA seq
DB search
MAEISSKELYEFKRTINELSDKKGRGTELVSVYIPPDRQVSDVVKHMREELSQSANIKSK
QTKKNVQSAIEVIMQRLKLFPKPPEKGLVLFVGMIPKGGPGTEKMENYVFEPPEPIKTYT
YHCNSEFFLEPLQEMLGDKEIYGLAVIDRKEATVAVLKGKRIDIVKTLTSGVPGKHKAGG
QSQRRFDRLIDLAAHEFKKRIGETINEAFLAIPEMEGVIIGGPGHTKEEFVKGDYLHHEI
KNKVITTVDTSYTGEFGIREVIEKSMDVLAEIDVMREKKLVQKFLTELVSDEGLASYGEA
EVRKNLEMGAVEVLLLSEDINSRRDKFECPSCGFIDAKTFKNTKTESEENCPQCGEKMNL
IESKDVIDDFVEMAEEVGSEVEIISTETEEGMQLLKAFGGVGAVLRYRV
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
gtggctgaaatatcatcaaaggagttatacgagtttaaaaggacaatcaatgagttgtct
gataaaaaaggaaggggaacagaactcgtatcagtatatattcctccagatcgccaggtt
agtgatgtggtaaaacacatgcgagaagaactgagtcaaagtgctaacattaaaagtaaa
cagactaaaaagaatgttcaatctgcaatagaagttataatgcagcgattaaaacttttc
ccaaaacccccggaaaaggggttagttctatttgtgggaatgatcccgaaaggtggcccg
ggaacagagaagatggaaaattatgtttttgaacctccagagcctataaaaacttacaca
tatcactgtaactcagaatttttcctggaacctctacaggagatgctgggtgacaaagaa
atatatgggttggcagttattgataggaaagaagcaactgttgctgttctcaagggaaaa
aggatcgacatagttaagacattaaccagtggagttcctggtaagcataaggccggtgga
cagtcacagagaagatttgatcgtttgattgacctggcggcgcacgaatttaagaaaagg
atcggagagactataaacgaagcttttctagccatacctgaaatggaaggggttataatt
ggtggacctggtcacaccaaggaagaatttgtgaaaggagattatctgcatcatgaaata
aaaaataaagttataacaacggttgacacctcttatactggtgaatttggtataagagaa
gttattgaaaaatccatggatgttttagctgaaattgatgttatgcgtgaaaaaaagctg
gtccagaaatttttaactgaactggtaagtgatgaaggattggcttcttacggtgaagca
gaagttagaaaaaacctggaaatgggtgctgtggaagttctattactgtcagaagatata
aattctagaagagataagtttgaatgcccttcatgtggattcatagatgctaaaacattt
aagaacactaaaacagaaagtgaagagaattgtcctcagtgtggggaaaaaatgaatcta
atagaaagtaaggatgtaattgatgattttgtggagatggcagaagaagtgggatctgaa
gttgaaataatatccacagaaactgaagaaggaatgcagcttctaaaagcttttggaggt
gtaggtgcagttctccgttatagggtttaa
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