Methanobacterium sp. BRmetb2: CIT01_02380
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Entry
CIT01_02380 CDS
T05692
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
mett
Methanobacterium sp. BRmetb2
Brite
KEGG Orthology (KO) [BR:
mett00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mett03400
]
CIT01_02380
Enzymes [BR:
mett01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CIT01_02380
DNA repair and recombination proteins [BR:
mett03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CIT01_02380
Prokaryotic type
CIT01_02380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AXV37129
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Position
499077..500438
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AA seq
453 aa
AA seq
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MIQEERITHLNNKKIIEGAYVLYWMQSSQREHYNHALEYSILQANKLNLPLMVYFGLTDN
FPEANRRHYYFMLEGLKEVQSSLQERGINMLILNESPEIGASRLGRDASLAVVDGGYLKI
EKHWRAYTAENVKCPLIQVESNVVVPVETASPKEEYSAATLRRKLNKILNDFLVPLQRKT
LKKDPYEIKIPSFDIIDIDKAIKKLEVDETVREVVFYQGGARAALIKLKNFLQTKIDRFG
DLRNDPTQNYLSHLSPYLHFGQISPLYIALEAIKTDSPGVESFLEELIVRRELSMNYVYY
NPNYDSILGLPEWPRKTLYEHENDKREYIYTLEELEYAQTHDPYWNAAQKEMMVRGKMHG
YMRMYWGKKILEWTETPDKAFKIAIYLNNKYEIDGRDANGYTGVAWCFGKHDRAWKERKV
FGKVRYMNANGLRRKFKIENYVEEIDEIEKLEG
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
attattcaagaagaaagaataactcatttgaacaacaaaaaaattattgaaggggcatat
gttctctactggatgcaatcatcccagcgggagcattacaaccatgcacttgagtattct
attttacaagcaaataagctgaatttacctttaatggtttattttggtttaacagataat
tttccagaagcaaatcgccgtcattactatttcatgttggaaggtcttaaagaagttcaa
tcttcacttcaggaacgtggcataaacatgttaattcttaatgaatcccctgaaatcggt
gcctccaggttagggcgtgatgcatcattagccgtagtagatggtggttatctaaaaata
gaaaagcattggagagcatacaccgcagaaaatgtgaaatgtccactgatacaggtggaa
agtaatgtggtggtaccagttgaaactgcatcccccaaagaggagtattcagcagcaacc
ctcagaagaaagttaaacaaaatcctaaatgattttttagttcccctccaaagaaaaaca
cttaaaaaagacccatatgaaattaaaattccttcttttgatataattgatattgataag
gctattaaaaagcttgaagtagatgaaacagttcgagaagttgttttttaccagggaggt
gcccgtgctgctttaattaaattaaaaaattttctacaaaccaagatagataggtttgga
gatcttagaaatgaccccacacagaattatttatcccatctaagcccttatctgcatttt
ggacaaatatctcccctttacattgccctggaagctataaaaactgacagtcctggtgtt
gaaagttttcttgaagaactgattgttagacgagaattaagcatgaattacgtctattat
aacccaaattatgattccattctagggttaccagaatggccccgtaaaacactgtatgaa
catgaaaatgataaaagagaatacatttacacgttagaagagttagaatatgcccaaacc
catgacccttactggaatgcagctcaaaaggagatgatggttagaggtaaaatgcatgga
tacatgagaatgtactggggtaaaaagatattagaatggacagaaactcctgataaggct
tttaagatagcaatttatttgaataataaatatgaaattgacggccgtgacgctaatgga
tatactggtgttgcatggtgttttggtaagcatgatagggcatggaaagaacgaaaagtt
ttcggcaaggtgcgatacatgaacgccaatggactacgaaggaaatttaaaattgaaaac
tatgttgaagaaattgatgaaattgaaaagctggaaggataa
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