Methanobacterium sp. BRmetb2: CIT01_02995
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Entry
CIT01_02995 CDS
T05692
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
mett
Methanobacterium sp. BRmetb2
Pathway
mett03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mett00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CIT01_02995 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mett03021
]
CIT01_02995 (rpoB)
Enzymes [BR:
mett01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CIT01_02995 (rpoB)
Transcription machinery [BR:
mett03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
CIT01_02995 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
RNA_pol_Rpb2_45
Zf_2nd_IFT121
DUF5817
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AXV37238
LinkDB
All DBs
Position
618784..620595
Genome browser
AA seq
603 aa
AA seq
DB search
MEKAKIYINGKLIGSCEEPEEFVQEIRKKRRSGEISEETNITYYNDTNEIYIFNDPGRAR
RPLIIVNDGQSMLEDEILSKLKQGEMEWKDLLNDGIIEYLDAEEEENAYIAMSSDQLNDE
HTHLEIDPSTMLGICAGIIPYANHNSSPRNTMEAGMTKQALGLYVSNYNLRTDTRAHLLH
HPQLPLVKTRIIDATAYDKRPSGQNFVVAVMSYEGYNMEDALILNKASIERGLSRSSFFR
SYEASERRYPGGQEDRFEVPEKGVRGYRSEEVYKHLDEDGIVNPESEVKSGDVLIGKTSP
PRFLEEIDEFGTVAERRRETSVTVRHGEKGIVDAVLLTETVEGSKLAKIRVRDQRQPEFG
DKFASRHGQKGVVGLIVSQENMPFTEEGVVPDLVVNPHAIPSRMSVGQVLEMIAGKAGCL
EGKRMDGTPFSGDHEGEIKELLKSNGFETAGVESLYNGITGERIEAEIFIGVAYYQKLHH
MTSDKVYARSRGPVQVLTRQPTEGRAREGGLRFGEMERDCLIAHGAALALKERLLDESDK
YEAIVCGECGMIAVYDRIRDKKYCPICGESDSFPVEISYAFKLLLDELKSLCIYPRLVLE
DKA
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaaagctaaaatttacattaatggtaaacttataggaagctgcgaagaacctgaa
gaatttgtccaagagattaggaaaaagcgaagatcaggcgaaatttcagaagaaaccaat
ataacttattataacgataccaacgaaatttacatatttaacgaccccggaagggctaga
agacctcttataatagtaaacgacggtcaatcaatgttagaagatgaaattctatctaaa
ctaaagcagggcgagatggaatggaaagatcttctaaatgatggtataatcgaatattta
gacgctgaagaagaagaaaacgcttacattgccatgtcttcggatcaattaaacgatgaa
cacacccacctagaaatagatccctctaccatgctggggatatgtgccggtattattcct
tatgccaatcacaattcctctccaagaaataccatggaagcagggatgactaaacaggca
ctgggtctatatgtttcaaattataatttaaggacagatacacgagctcaccttttacat
cacccccaactacctttagtcaaaactagaatcatcgatgcaactgcttatgataaacga
ccttctggccaaaactttgtagtggctgtgatgagttatgaaggatacaacatggaagat
gctcttatcctcaataaagcatctattgaaagaggattgtcacgatcatcattttttaga
tcatacgaagcttcagagcgaagatatcctggtggacaggaagaccggtttgaagtgcca
gaaaagggtgttagaggatacagatccgaggaagtttacaagcatttagatgaagacgga
atagtaaaccccgagtcggaagtaaaatctggtgatgttctgattggtaaaacatctcca
ccccgatttttagaggaaatagacgaatttggaactgtggctgaaagaagaagagaaacc
tcagtaactgtacgacacggagaaaaaggaattgtggatgcagtactattaactgaaacc
gtggaaggaagtaaacttgctaaaatacgggtgcgtgaccaacgtcaacctgaatttggg
gataaatttgcttcaagacacggacaaaaaggtgttgtaggtttaatagtttcacaagag
aacatgccctttacagaagaaggtgttgttccagatctagtggtcaacccccacgctatc
ccttcaaggatgtctgtaggacaggttcttgagatgatagcaggtaaagctggttgttta
gaaggaaaacgaatggatggaacacctttcagtggagaccatgaaggagaaataaaagaa
ctgttaaaatccaatggatttgaaacagcgggtgttgaatcactgtataacggtataacc
ggtgaaagaatagaagcagaaatattcattggagtagcttactaccagaaattgcaccac
atgacctccgacaaagtttatgccagatccagaggaccggtccaggtattaaccagacaa
ccaactgaaggtagagcaagagaaggtggtcttagatttggagaaatggaaagagactgt
ctaatagcacatggtgctgctctggccttaaaagaaagattattagacgaatcagacaag
tacgaagctattgtttgtggtgagtgtggaatgattgctgtgtatgatcgaatcagggat
aagaaatactgtccaatatgtggagaatctgattcattccctgtagaaatttcctacgca
tttaaattattacttgacgaacttaagagcctatgtatatacccaagactggttttagaa
gataaagcataa
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