Methanobacterium sp. BRmetb2: CIT01_05455
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Entry
CIT01_05455 CDS
T05692
Name
(GenBank) phosphoesterase
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mett
Methanobacterium sp. BRmetb2
Pathway
mett03410
Base excision repair
mett03430
Mismatch repair
mett03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mett00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CIT01_05455
03430 Mismatch repair
CIT01_05455
03440 Homologous recombination
CIT01_05455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mett03400
]
CIT01_05455
DNA repair and recombination proteins [BR:
mett03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CIT01_05455
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CIT01_05455
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CIT01_05455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
DHH_CID
Motif
Other DBs
NCBI-ProteinID:
AXV37681
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All DBs
Position
complement(1068115..1069476)
Genome browser
AA seq
453 aa
AA seq
DB search
MNQKKQHYLLNKAEEAGNLLKSHIEQDHIVRIISHNDSDGLSSAGIICNAISKLNGKFHV
TIVPRLREGFIKKLAQEKYKLFFFCDMGSAALEPLSRLKREVIVADHHQTPGDSDDEIKN
ITHINPHLYEIDGTKDVSASGVSYIIVRGMDNKELAGLALTGAFGDMQGVDGFTGINKMI
LDEGIQAGTVEMHDDLKIAYKNEEPIYKSLAYTINPVLPGLTGDLEGSMGFLEKMGVSYG
IKFSDLSNEERDILKEELIKVNEKIFGTVYSMPREVPPLKNIEDYARVLDACGKNKKYGL
GLSICLGDKKESVEEAQKLVKKYQDNLVNGIDWIKKEGSVKLDYIQHIYTEDKRKKSLMG
TLASVGLELRYLDPEKPVIAISKMDNVIKISGRTTNQQIQNGVNLGKALEQASKSFNGAG
GGHNIAAGAVVPYKEMDNFLNLVNDIVSEQINS
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaaaaaaagcagcattacttgttaaataaagctgaagaagctggaaatcttctt
aaaagtcatatagaacaggatcatattgtgagaataatttctcacaatgattctgatggc
ctttcttcagctggaataatatgtaacgcaatttcaaaacttaatggtaaatttcatgtt
accattgtaccccgcctacgtgaaggttttattaaaaagctggctcaggaaaaatataaa
ttattctttttttgtgatatgggaagtgctgccttagaacctctaagcagactaaaaaga
gaagttatagtggctgatcaccaccaaacacctggcgatagtgatgatgaaatcaaaaac
ataacccacataaatccccatctttatgaaatagacggtacaaaggatgttagcgcctcc
ggtgtctcttatataattgttagagggatggataataaagaattggcaggattagcatta
actggagcattcggagatatgcaaggtgttgatggatttactggtattaataagatgata
ttggatgaaggaatccaagccggaacagtggaaatgcacgacgacttgaaaattgcatac
aaaaacgaagaaccgatttataaatcactagcctacaccattaatcctgttttacccggc
ctcacaggagatttagaaggttcaatgggatttttagaaaaaatgggagtttcttatggg
ataaaattcagtgatcttagtaacgaagaaagagatatcttaaaagaggagttaatcaaa
gtcaacgaaaagatctttggaactgtttacagtatgcctcgggaagttcctcctctgaaa
aatattgaagattatgcccgggtattagacgcttgtggtaaaaataaaaaatatggacta
ggtttgagtatttgtttgggagacaaaaaagaatcagtggaagaagctcaaaaattagtc
aaaaaataccaggataacttggtaaatggaattgactggattaaaaaggaaggatctgtt
aaattagattatattcaacatatttatactgaagataaacgtaaaaagagtttaatgggt
actttggctagtgttgggttggaattaaggtatttagatccagaaaaaccagttatagcc
atatccaaaatggacaacgtaataaagatctcaggaagaaccaccaaccaacaaattcaa
aatggagtaaatttgggtaaggcattagaacaggcatctaaaagcttcaatggtgctgga
ggcgggcataacattgccgctggagcagtagtaccctataaagaaatggataatttttta
aatttagtaaatgatattgtatcagaacagatcaactcttaa
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