Methanobacterium sp. BRmetb2: CIT01_06850
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Entry
CIT01_06850 CDS
T05692
Symbol
fen
Name
(GenBank) flap endonuclease-1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
mett
Methanobacterium sp. BRmetb2
Pathway
mett03030
DNA replication
mett03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mett00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CIT01_06850 (fen)
03410 Base excision repair
CIT01_06850 (fen)
03450 Non-homologous end-joining
CIT01_06850 (fen)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mett03032
]
CIT01_06850 (fen)
03400 DNA repair and recombination proteins [BR:
mett03400
]
CIT01_06850 (fen)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mett04147
]
CIT01_06850 (fen)
DNA replication proteins [BR:
mett03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
CIT01_06850 (fen)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
CIT01_06850 (fen)
DNA repair and recombination proteins [BR:
mett03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
CIT01_06850 (fen)
Exosome [BR:
mett04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CIT01_06850 (fen)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
AXV37936
UniProt:
A0A347AG39
LinkDB
All DBs
Position
1367396..1368382
Genome browser
AA seq
328 aa
AA seq
DB search
MGVKLKDIVKPEEIKFEDLKGKIVAIDAANALYQFLSSIRQQDGTPLKDHQGRVTSHLSG
LLYRTSALVDKGIKPVYVFDGKSHSLKGDTQTKRSEIRIESEKKWKKALEKGEIEEARKY
AVRSSRMSAEIIESSKKLLDLMGIPFIQAVGEGEAQATYMVQNGDAWCVASQDYDCILFG
APLMVRNLAISSTRANLEMFELNKVLNNLDITREQLVDVAILVGTDFNQGIKGVGAKTGL
KLLKEHKDIYSVIKHLDVEMEVDPAVLRDIFLKPDVAVDYEIKWKKPDKDELIDFLSGEH
SFSQDRVLNAVEKIKGLNITQKSLEDWF
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtgaaacttaaagatattgtgaaaccagaagagataaaatttgaagatttgaag
ggtaaaatagtagctattgatgcggctaatgctctttatcagtttttatcaagcatacgc
cagcaggatggcacaccactaaaggatcaccagggtagagtaacatctcatttaagtgga
cttttatacagaacctcggcactggtagataaaggaataaaaccggtttatgtattcgat
ggaaagtcacattctttaaaaggagatactcaaactaaaagaagcgagattaggattgaa
tctgagaaaaaatggaaaaaggcccttgaaaagggggaaatagaggaagctcgtaaatat
gctgttagatcttcaagaatgtcagcagaaattattgaaagttcaaaaaaacttttagat
ctcatgggaataccatttatccaagctgtgggggaaggagaagctcaagccacatacatg
gttcaaaatggcgatgcatggtgtgttgcatctcaagattatgactgtattttatttggc
gcacccctcatggtaaggaatttagctatctcctctacaagagctaatttagaaatgttt
gaattaaataaagttttaaataatttggacataactcgagaacaactggtagatgtagca
atactggttggaactgatttcaatcagggaataaaaggtgtaggtgcaaaaactggctta
aaactcttaaaggaacataaagatatttacagtgttataaaacatttagatgttgaaatg
gaagttgatcctgctgtccttcgagatatatttctaaaacctgatgttgcagttgattat
gagataaaatggaaaaaaccagataaagatgagctaatcgattttttaagtggagaacac
agtttttcacaggatcgagttctaaatgcagtagaaaagataaaaggattgaatattact
caaaaaagtttggaagattggttttaa
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