Methanobacterium sp. BRmetb2: CIT01_06885
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Entry
CIT01_06885 CDS
T05692
Name
(GenBank) mRNA surveillance protein pelota
KO
K06965
protein pelota
Organism
mett
Methanobacterium sp. BRmetb2
Pathway
mett03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mett00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CIT01_06885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mett03019
]
CIT01_06885
Messenger RNA biogenesis [BR:
mett03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
CIT01_06885
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
eRF1_1
eRF1_3
eRF1_2
AAA_30
SpoU_sub_bind
TerL_ATPase
Motif
Other DBs
NCBI-ProteinID:
AXV37942
UniProt:
A0A347AG45
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All DBs
Position
1376588..1377649
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AA seq
353 aa
AA seq
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MQIVYEDLNKGIIELIPEILDDLWHLSHIIEKGDLLSSKTTRRIQDTTGERIRSDRGIKK
TFFLGIRVEDVNFHKYTGKLRATGVIEKGPEDLVPLGSHHTIDLKLKNSIKIKKEKWSRW
TLKRLKEAIKSSKKPSAVIISIEDDVADLGIVKQYGIDYYGPIIGNISGKRIIQKDRQKS
IIEFYNEVVNALLNFKEISTIIIAGPGFTKGDFFKFLQEKFPDLAKICIIESTGSGGRTG
INEVLKKGTIDQLAAENRIGQEISWVNKILEEVGKSSKLASYGKRHVKEAANSGAVEQLL
IIDEMVRQKDVEDLMDLVETMGGKVMIVSSEHEGGKQLMALGGIAAILRYSLG
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattgtctatgaagatctcaataagggaattatagagcttataccagaaatatta
gatgatttatggcatttatcacatataattgagaaaggcgacttgttatcttcaaaaaca
acccgcagaattcaggatacgaccggtgagagaataagaagtgataggggaataaaaaaa
accttttttttggggatacgagttgaagatgtaaatttccacaaatacactggtaaatta
cgggctacgggagtcatagaaaaagggcccgaggatctggtgcctttaggttcgcatcac
actatagatttaaaattgaaaaattcaattaaaattaaaaaggaaaaatggtcccgatgg
accttaaaacgacttaaagaagctattaaatcatcaaaaaaaccttcagcagtaataata
tcaatcgaagacgatgtcgctgatttgggaattgtaaaacagtatggtattgattattat
ggtcctataataggaaatatatctggaaaaagaataatacagaaagataggcaaaaatct
ataatcgaattttataatgaagttgttaatgccctattaaactttaaagagattagtacc
attatcatcgcggggccaggctttaccaagggagattttttcaaatttttacaggaaaaa
tttccggatttagctaaaatatgcatcatagaaagtacaggttctggtggccgtacagga
atcaacgaagtacttaaaaaaggcactatagatcaactggctgctgaaaatagaattgga
caggaaatcagttgggtaaacaagatcttagaagaggtaggtaaatcctctaaactggcc
agttatggtaaaagacatgttaaagaggcagctaattctggtgcagttgaacaattatta
ataattgacgaaatggttcgccagaaagatgttgaggatttgatggatctggtagaaact
atgggtggtaaagttatgattgtaagcagcgagcacgaaggaggaaaacagttaatggcg
ctgggtggtattgctgcaattttaaggtatagtttgggttag
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