KEGG   Methanobacterium sp. BRmetb2: CIT01_07160
Entry
CIT01_07160       CDS       T05692                                 
Name
(GenBank) ribosome biogenesis/translation initiation ATPase RLI
  KO
K06174  ATP-binding cassette, sub-family E, member 1
Organism
mett  Methanobacterium sp. BRmetb2
Brite
KEGG Orthology (KO) [BR:mett00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mett03009]
    CIT01_07160
Ribosome biogenesis [BR:mett03009]
 Eukaryotic type
  Pre-40S particles
   Other pre-40S particles
    CIT01_07160
SSDB
Motif
Pfam: ABC_tran Fer4_RLI AAA_21 SMC_N Fer4 AAA nSTAND3 RNA_helicase Rad17 AAA_23 AAA_24 AAA_16 Fer4_21 Fer4_7 RuvB_N AAA_29 Fer4_10 AAA_15 RsgA_GTPase DUF359 NACHT Fer4_2 NB-ARC AAA_18 Fer4_6 AAA_13 Fer4_9 KAP_NTPase Fer4_3 Fer4_16
Other DBs
NCBI-ProteinID: AXV37992
UniProt: A0A347AG95
LinkDB
Position
complement(1433797..1435575)
AA seq 592 aa
MTRIAILDHDRCQPKKCNYTCIEYCPGVRMEEDTITIDEKTKKPIISEELCSGCGICTNR
CPFEAIAIINLPEALEDPIHRYGQNMFELFGLPNIKEGSVVGILGPNGIGKSTIIRILSG
ELKPNLGFYEKEVGWDEIISYFKGSQLQSYFQKLSKGNLKTAHKPQMVDLLPKFVKGEVS
LLLEKVDERGQLNEVMETLEIGPILNRDISKLGGGELQRVAIAAAVLKDADFYYFDEPTS
WLDVRQRLNAVKVIRSLAEEGKSVMVIEHDLAALDAISDYVHVLYGHPGAYGVVSHMRGV
RVGINAYISGFLREENVRFRKNAILFEVKPPSEGVEAEAIADYSSIKKSYDGFKFDAQEG
EVHFNEIVTAFGPNGIGKTTFAKILADVIKPDEGKINKKVSIAYKPQYLSTKFEGTVQEL
LITTAPSYGTNIFKSEIVKPFSLDDIMDKEVKDLSGGELQRLAIATTLSKDADIYLFDEP
TAFLDVEQRLVAARAIRKIIENRHCASIIIDHDIVFIDYISDRAMVFYGKPGLEGHATAP
TDLRSSMNKFLSDVGITFRRDKETKRPRVNKFGSYLDRTQKEQGEYYYLKDN
NT seq 1779 nt   +upstreamnt  +downstreamnt
ttgacaagaattgctatactggatcatgatcggtgccaacccaaaaaatgtaattacaca
tgcatagaatactgtccaggagttaggatggaagaagacaccataaccatagacgaaaaa
accaaaaaaccaataatatccgaagaactatgttccggatgtggaatatgtactaatcga
tgcccatttgaagctattgcgattatcaatctccctgaagcattagaagatcccatccac
cgttatggtcaaaacatgtttgaattatttggcctgcccaatattaaagaaggatcagtt
gtagggattttaggacctaatggaataggaaaatcaacaattataagaattttatccgga
gaacttaaaccaaacttgggattctatgaaaaagaagtgggctgggatgaaataatatct
tacttcaaaggctcccagctgcaatcatacttccaaaaactttccaaaggcaatttaaaa
actgcccataaaccccagatggtggatttgctgcctaaatttgttaaaggggaagtaagc
ttacttttagagaaagttgatgaaagaggccagttaaatgaagtaatggaaactttggag
attggaccaatattaaaccgggacatatccaagttaggtggtggagagcttcaaagggtt
gctatagcagcagcagtcctgaaagatgctgatttttattattttgacgaacccacatcc
tggttagatgtgaggcagagattgaatgcagtgaaagtaataagatctcttgcagaagaa
ggaaaatctgtaatggtaattgaacacgacctggccgcattagatgctatatctgattac
gtccatgtattgtatgggcatcccggagcttacggcgtagtatcccatatgaggggagtt
agggttggaataaacgcttatatcagcggatttttgagagaagaaaatgtaaggtttaga
aagaacgccatactatttgaagttaaacctccttcagaaggagtagaagcagaagctatt
gctgattattcttccataaaaaaatcatatgatggtttcaaatttgatgctcaggaagga
gaggtgcattttaacgagattgtaacagcatttggtcctaatggaataggaaaaaccact
tttgccaagatactggcagatgtaatcaagcccgatgaaggaaaaataaataaaaaggtt
tctatagcttataaaccccaatatttatctactaaatttgaaggaactgtacaagaactt
ttaataacaactgcaccaagttatggtacaaatatattcaaaagtgagattgtaaaacct
ttttcattagatgatattatggataaggaagtaaaagatttaagtggaggagaacttcaa
agactggccattgccactaccttatcgaaagatgctgatatttatcttttcgacgagcct
acagcatttttggatgtggaacaaagacttgtagcagccagggccataagaaaaattatt
gaaaaccgccactgtgcatctataataatagatcacgatattgtatttattgattacata
tctgatcgggccatggtcttttatggtaaacctggattagagggtcatgccactgcacca
actgatcttagatcttccatgaacaagttcctttcagatgtgggtataactttccgaaga
gacaaagaaacaaagagaccacgggttaataaatttgggagttatcttgatcgaacccaa
aaagagcagggcgaatattattatctcaaagataactaa

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