Methanobacterium sp. BRmetb2: CIT01_07160
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Entry
CIT01_07160 CDS
T05692
Name
(GenBank) ribosome biogenesis/translation initiation ATPase RLI
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
mett
Methanobacterium sp. BRmetb2
Brite
KEGG Orthology (KO) [BR:
mett00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mett03009
]
CIT01_07160
Ribosome biogenesis [BR:
mett03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
CIT01_07160
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Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
Fer4_RLI
SMC_N
Fer4
AAA
nSTAND3
RNA_helicase
Rad17
AAA_23
AAA_15
Fer4_21
NB-ARC
LdpA_Fe-S-bd
AAA_24
Fer4_7
AAA_16
RuvB_N
DUF359
AAA_29
Fer4_2
Fer4_10
NACHT
RsgA_GTPase
Fer4_6
AAA_18
AAA_13
KAP_NTPase
Fer4_9
Fer4_3
Fer4_16
Motif
Other DBs
NCBI-ProteinID:
AXV37992
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All DBs
Position
complement(1433797..1435575)
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AA seq
592 aa
AA seq
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MTRIAILDHDRCQPKKCNYTCIEYCPGVRMEEDTITIDEKTKKPIISEELCSGCGICTNR
CPFEAIAIINLPEALEDPIHRYGQNMFELFGLPNIKEGSVVGILGPNGIGKSTIIRILSG
ELKPNLGFYEKEVGWDEIISYFKGSQLQSYFQKLSKGNLKTAHKPQMVDLLPKFVKGEVS
LLLEKVDERGQLNEVMETLEIGPILNRDISKLGGGELQRVAIAAAVLKDADFYYFDEPTS
WLDVRQRLNAVKVIRSLAEEGKSVMVIEHDLAALDAISDYVHVLYGHPGAYGVVSHMRGV
RVGINAYISGFLREENVRFRKNAILFEVKPPSEGVEAEAIADYSSIKKSYDGFKFDAQEG
EVHFNEIVTAFGPNGIGKTTFAKILADVIKPDEGKINKKVSIAYKPQYLSTKFEGTVQEL
LITTAPSYGTNIFKSEIVKPFSLDDIMDKEVKDLSGGELQRLAIATTLSKDADIYLFDEP
TAFLDVEQRLVAARAIRKIIENRHCASIIIDHDIVFIDYISDRAMVFYGKPGLEGHATAP
TDLRSSMNKFLSDVGITFRRDKETKRPRVNKFGSYLDRTQKEQGEYYYLKDN
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
ttgacaagaattgctatactggatcatgatcggtgccaacccaaaaaatgtaattacaca
tgcatagaatactgtccaggagttaggatggaagaagacaccataaccatagacgaaaaa
accaaaaaaccaataatatccgaagaactatgttccggatgtggaatatgtactaatcga
tgcccatttgaagctattgcgattatcaatctccctgaagcattagaagatcccatccac
cgttatggtcaaaacatgtttgaattatttggcctgcccaatattaaagaaggatcagtt
gtagggattttaggacctaatggaataggaaaatcaacaattataagaattttatccgga
gaacttaaaccaaacttgggattctatgaaaaagaagtgggctgggatgaaataatatct
tacttcaaaggctcccagctgcaatcatacttccaaaaactttccaaaggcaatttaaaa
actgcccataaaccccagatggtggatttgctgcctaaatttgttaaaggggaagtaagc
ttacttttagagaaagttgatgaaagaggccagttaaatgaagtaatggaaactttggag
attggaccaatattaaaccgggacatatccaagttaggtggtggagagcttcaaagggtt
gctatagcagcagcagtcctgaaagatgctgatttttattattttgacgaacccacatcc
tggttagatgtgaggcagagattgaatgcagtgaaagtaataagatctcttgcagaagaa
ggaaaatctgtaatggtaattgaacacgacctggccgcattagatgctatatctgattac
gtccatgtattgtatgggcatcccggagcttacggcgtagtatcccatatgaggggagtt
agggttggaataaacgcttatatcagcggatttttgagagaagaaaatgtaaggtttaga
aagaacgccatactatttgaagttaaacctccttcagaaggagtagaagcagaagctatt
gctgattattcttccataaaaaaatcatatgatggtttcaaatttgatgctcaggaagga
gaggtgcattttaacgagattgtaacagcatttggtcctaatggaataggaaaaaccact
tttgccaagatactggcagatgtaatcaagcccgatgaaggaaaaataaataaaaaggtt
tctatagcttataaaccccaatatttatctactaaatttgaaggaactgtacaagaactt
ttaataacaactgcaccaagttatggtacaaatatattcaaaagtgagattgtaaaacct
ttttcattagatgatattatggataaggaagtaaaagatttaagtggaggagaacttcaa
agactggccattgccactaccttatcgaaagatgctgatatttatcttttcgacgagcct
acagcatttttggatgtggaacaaagacttgtagcagccagggccataagaaaaattatt
gaaaaccgccactgtgcatctataataatagatcacgatattgtatttattgattacata
tctgatcgggccatggtcttttatggtaaacctggattagagggtcatgccactgcacca
actgatcttagatcttccatgaacaagttcctttcagatgtgggtataactttccgaaga
gacaaagaaacaaagagaccacgggttaataaatttgggagttatcttgatcgaacccaa
aaagagcagggcgaatattattatctcaaagataactaa
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