Methanobacterium sp. BRmetb2: CIT01_08095
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Entry
CIT01_08095 CDS
T05692
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mett
Methanobacterium sp. BRmetb2
Pathway
mett03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mett00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CIT01_08095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mett03400
]
CIT01_08095
Enzymes [BR:
mett01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CIT01_08095
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CIT01_08095
DNA repair and recombination proteins [BR:
mett03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CIT01_08095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
zf-FPG_IleRS
Fpg-like_C
zinc-ribbons_6
Motif
Other DBs
NCBI-ProteinID:
AXV38159
UniProt:
A0A347AGR2
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All DBs
Position
1633120..1633899
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AA seq
259 aa
AA seq
DB search
MPELPSVEVYKQYFDSCSLNQIIKSVNFESKEILTEKPARFRKVLDGCWFTSSGRYGKYL
FAHLDNGYSLIMHFGMTGFLEYDSIPLRNPYSRFSIHFQNKHVLAFIDPRKFGKIGLTRS
IDDFITKKKLGPDALDISYQSFKEIFKKRRGMLKPLLLNQNFIAGIGNLYADEILYQSRL
HPLIPADELKPSQIKKLFSSTKKVLKKAIDYMDKPENLPDSYLLPHRYIGGECPCGGKIN
IIKVGGRTTYFCPECQKSL
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattacccagtgtcgaagtttataagcagtattttgattcatgttcattaaat
cagatcattaagagtgttaacttcgaaagcaaagaaatattaactgaaaaacccgccaga
ttccggaaagttttagatgggtgttggtttacttccagtggccgttatgggaaatatctt
tttgcccatttagataatggttactcattgataatgcattttggcatgactggcttcctg
gaatatgattcaatccccttaagaaatccctacagccgattttccattcatttccagaat
aaacatgttttagcttttattgaccctcgaaagtttggaaagataggtttgacccggtca
attgacgatttcataaccaaaaagaaattaggccctgacgctcttgatataagttatcag
tcctttaaggaaatatttaaaaagagaaggggaatgttaaaacctctcctgttgaaccag
aattttattgcaggtattggtaatttatacgcagatgaaatactttatcaaagcagacta
catcccttaatccctgctgatgaattaaaaccttcccaaattaaaaaattgttcagttca
accaaaaaagttctaaaaaaggccatagactacatggataaacctgaaaatttgccggat
tcctatctgcttccacaccgatacattggtggtgaatgtccctgtggaggcaagatcaac
attattaaagtaggaggaagaacaacttacttttgccctgaatgccagaaaagtttataa
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