Methylococcus geothermalis: GNH96_00100
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Entry
GNH96_00100 CDS
T06585
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
metu
Methylococcus geothermalis
Pathway
metu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
metu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GNH96_00100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metu03400
]
GNH96_00100
Enzymes [BR:
metu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GNH96_00100
DNA repair and recombination proteins [BR:
metu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GNH96_00100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
Helicase_C
ResIII
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
AAA_19
HypA
TrwB_AAD_bind
nSTAND_NTPase5
LAL_C2
ADDB_N
Motif
Other DBs
NCBI-ProteinID:
QJD28525
UniProt:
A0A858Q3Y5
LinkDB
All DBs
Position
complement(21103..23319)
Genome browser
AA seq
738 aa
AA seq
DB search
MTISRTEKVVRVAVPIPAYRCFDYLPPSGVGLSDLLPGLRLRVPFGNRTRVGYLIAVAET
PECDVARLRPAEAVLDDKPLLSETDVKLLQWAARYYHHPLGEVFQLAFPVHLREGRSAEV
TRPQGLTLTPAGAALDPPVLKRAPAQRMLLETLRGAEYPFPASRLAETGSSARAAQDAAR
RLVERGWAEWVDLPDGRIPAAIRPPLPLNVAQRAAVDAVSAHLGRYGAFLLEGVTGSGKT
EVYLEVIRRVVARGEQALVLVPEISLTPQLEQRLRERIEAPLAVFHSGLNETERTAAWLG
FQQGDIRVLLGTRSAVFVPMRRPGIIILDEEHDRSFKQQEGFRFSARDVAVMRARMADIP
LVAGSATPSLESIRNVQRGRYVRLSLPARAGVAVEPRYRLLDIRSRRLQEGLSEALIAAI
RETLAEGGQVLLFLNRRGFAPALICHGCGWVAQCRRCDANLVLHAREARLRCHHCAAEHG
LPPRCPSCGQEDLRPLGIGTERVDQALQRLFPEIGVARIDRDSTRGRHSLARILERVHQG
EVRILLGTQMLAKGHHFPGVTLVGILDVDAGFYSTDFRAAEHTAQLIVQVAGRAGRGEKP
GTVLLQTRHPDHPLLQRLLRDGYPGFAAAELAEREAACLPPFGYQALWRAESKDLGRAMD
FLARLREEAEGKNGAVHWLGPAPAPMPRQAGRYRAQLWLKSARREALHASLTDALARLQE
TPERRVRWSLDVDPVDFY
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcagccgcacggaaaaagttgtcagggttgccgttcccattccggcataccga
tgtttcgactaccttcctccctcgggtgtcggcctctcggacttgctccccggtctccgc
ctgcgcgtccctttcggtaaccgtacccgcgtgggctatctcatagccgtcgcggaaacc
cccgaatgcgacgtcgcgcggctgcgcccggccgaggcggtcctggacgacaagccgctg
ctgtccgagaccgatgtgaagctgttgcaatgggcggcgcgctattaccaccatccgctg
ggggaggttttccagctcgcgttccccgtgcatctgcgggaagggcgttcggcggaagtc
acccgccctcagggattgaccctcacgccggccggcgccgccctcgatccgccggtgctg
aagcgcgctcccgctcagcggatgctgctcgaaaccttgcgcggcgcggagtatccgttc
ccggcatcgcgattggcggagacaggaagctcggcccgcgcggcccaggatgccgcccgg
cgtctggtcgagcgcggttgggccgaatgggtggatttgccggacggcaggattcccgcc
gccattcggccgccgttgccgctcaatgtggcccagcgcgcggcggtcgatgcggtttcg
gcacacctgggccgttatggcgcctttttgctcgaaggggtgaccggcagcggtaagacc
gaggtctatctcgaagtgatccggcgggtcgtcgctcgcggcgagcaggcgctggtcctg
gtgcccgagatcagcctcaccccgcagctcgagcagaggctgcgcgagcggatcgaggcg
ccgctggccgtgttccattccggattgaacgagacggagcgcaccgccgcctggctgggt
tttcagcagggcgacatccgggtgctgctcggcacccgttccgccgtgttcgtgcccatg
cgccggccgggaatcatcatcctggacgaggagcacgaccgctctttcaagcagcaggaa
ggattccgcttctcggcgcgcgatgtagcggtgatgcgtgcacgcatggcggatatcccg
ctggtcgcgggctccgctaccccttcgctggagtcgatccgcaatgtccagcgtgggcgc
tatgtccggttgagcctgccggcgcgggccggcgtcgccgtggagccgcgctaccgtttg
ctcgacatccgctcgcgccgcttgcaagaaggactgtccgaggccttgatcgcggcgatc
cgcgaaaccctggccgagggcgggcaggtgctgctgttcctcaaccgccggggattcgcg
ccggcgctgatctgccacggctgcggatgggtcgcgcaatgccggcgttgcgatgccaac
ctggtgctgcatgcccgcgaggcccggctgcgttgccatcactgcgccgccgagcatggc
ctgccgccgcgctgtccgtcctgcggacaggaagacttgcgaccgttgggaatcggtacc
gaaagggtcgaccaggctttgcagcggctgttcccggaaatcggcgtggcgcggatcgac
cgcgacagcacccgagggcgccacagtctggcgcggatactcgagcgggtgcaccaaggc
gaagtgcggatactgctggggacccagatgctggccaagggacatcacttccctggcgtg
accctggtcggaatcctcgacgtggatgccggattctacagcaccgatttccgtgcggcc
gagcataccgcccagttgatcgtacaggtggcgggccgggccggacggggcgaaaagccc
ggcacggtattgctgcagacccgccatccggatcatcccctgctgcagcgcctgctgcgc
gacggctatccgggattcgccgccgccgaactcgccgagcgtgaggcggcctgcctgccg
cccttcggatatcaggctttgtggcgggcggagtcgaaagacctcggtcgggcgatggat
ttcctggcgcgcttgcgcgaggaggccgagggaaagaacggcgcggtgcactggctcggc
ccggcgcccgcgccgatgccgaggcaggccgggcgctaccgggcccagctttggctcaag
agcgcccggcgcgaggccctgcacgccagcttgaccgatgccctggcgcggctgcaggaa
acgccggagcggcgcgtgcgctggtcgctggacgtcgatccggtggatttttactga
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