Methylococcus geothermalis: GNH96_01935
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Entry
GNH96_01935 CDS
T06585
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
metu
Methylococcus geothermalis
Pathway
metu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
metu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GNH96_01935 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metu03400
]
GNH96_01935 (recF)
DNA repair and recombination proteins [BR:
metu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GNH96_01935 (recF)
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_15
AAA_29
AAA_27
ABC_tran
AAA_13
DUF2813
AAA_16
NACHT
Motif
Other DBs
NCBI-ProteinID:
QJD28842
UniProt:
A0A858Q4S4
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All DBs
Position
complement(419017..420093)
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AA seq
358 aa
AA seq
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MALLRLDVADVRNIESASLSPGEGLNLLFGANGSGKTSLLEAIYLLSRGKSFRSSQPHRI
IRFDQPFLTVAGRIGQPGGGTTVGLRLGRNAKEVRVGGRHCDSSAHLIRLFPAVLTQPAS
VALLDGPPRLRRQMLDWGVFHVEQEYLDLLRRFSRALDQRNTALRTDASRSNLEAWSGEV
ARWGTMIAEARSAYVERIRGQFAKISSALLGPLDAELVVRQGWRTGWSYAEALAASVAMD
RRRGYTEPGPHKGDFTVLIGGRPAKDFFSRGQLKLLTYALLLAQACRLEEDQPGRACLLV
DDIASELDPRNQEKLLSLLKSTGIQSFITFSGNDLGWVTAGHTARMFHVEHGRILADE
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggcactgttgaggctcgatgttgccgatgtccggaacattgaatccgcaagtctgagt
cccggcgaggggctcaatctgctgttcggcgccaacggcagcggcaagacctcgttgctc
gaggcgatctatctgctcagccggggtaaatcttttcgctcgtcccagccccatcgcatc
atccgattcgatcagccgtttcttaccgtcgccggccggatcggacaacccggtgggggc
accaccgtaggccttcgtctcgggcgcaacgctaaggaagttcgggtgggcggtcgacac
tgcgactcgagtgcgcacttgatccggctattccccgcggtcttgacccagccggccagt
gtcgcgttgctcgatggtccgcctcgattgagaaggcagatgctcgactggggagtgttc
cacgtggaacaagagtacctcgatctcttgcgccgcttttcgagggcgcttgatcagcgc
aacacggctctccggacggatgcttcccggtcgaatctggaggcatggtcgggggaggtg
gcgcgatggggtacaatgatcgctgaagcgcggtcggcgtacgtcgagcgcattcggggc
cagttcgcgaaaatatcatccgccttgcttggcccgctcgatgccgagctggtcgtccgg
cagggctggagaacgggctggtcctatgcggaagccctcgccgcatccgtcgcgatggat
cgcaggcggggatacacggagcccggtccgcacaagggggacttcacggtcttgatcggc
ggacggccggcgaaggattttttttcgcgtggtcagttgaagctcctgacatacgcgctt
ttgctggcgcaagcttgccggttggaagaggatcagccggggcgagcctgcctgctggtc
gacgacatcgcctcggaactggatccccgcaatcaagagaagctgctgagcttgttgaaa
tcaaccggcattcagtcctttatcactttttccggtaacgatcttggatgggtcacggcc
ggacacaccgccagaatgttccacgtggaacacggccgcatcctggccgacgaatga
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