KEGG   Methylococcus geothermalis: GNH96_05210
Entry
GNH96_05210       CDS       T06585                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
metu  Methylococcus geothermalis
Pathway
metu00300  Lysine biosynthesis
metu00470  D-Amino acid metabolism
metu01100  Metabolic pathways
metu01110  Biosynthesis of secondary metabolites
metu01120  Microbial metabolism in diverse environments
metu01230  Biosynthesis of amino acids
Module
metu_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:metu00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    GNH96_05210 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    GNH96_05210 (dapF)
Enzymes [BR:metu01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     GNH96_05210 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: QJD29419
UniProt: A0A858Q6F6
LinkDB
Position
1082442..1083269
AA seq 275 aa
MLRFTKMQGLGNDFVVIDAIHQAVNLDAAGLRRLADRHYGIGCDQILLVEPPPSDEVDFR
YRIFNADGSEVAQCGNGARCFARFVRDKGLIDRDEIRVETASGRMVLRLEAGGEVRVDMG
VPRHAPAEVPLLAAEERLGYTVNIDGVDWTFGAVSMGNPHAVITVPDVDAAPVARVGAAL
ERHELFPERANIGFMQVLDSHHARLRVYERGTGETLACGSGACAAAVVGMLRGALQDPVR
IDLPGGALRIGWRGRGTPVHMSGPAVTVFEGSIEA
NT seq 828 nt   +upstreamnt  +downstreamnt
atgctgcgttttaccaagatgcagggactgggcaacgacttcgtcgtgatcgacgccatt
catcaggcggtcaacctggatgcggcgggattgcgccggctggccgaccggcattacggt
atcggctgcgaccagattctgctggtggagccgccgccgtcggacgaagtggatttccgt
taccggattttcaatgccgacggcagcgaggtggcgcaatgcggcaacggcgcgcgctgc
ttcgcccgcttcgtgcgcgacaagggtctcatcgaccgcgacgagatccgggtggaaacc
gcttccggccgcatggtgctgcggctggaggcgggcggcgaggtccgggtcgacatgggg
gtgccgcgccatgcgccggccgaagtgccgctgctggcggccgaagagcggctcggctac
acggtcaacatcgacggtgtagactggacattcggggccgtgtccatgggcaacccccat
gcggtgatcacggtacccgacgtcgacgcggcgcccgtggcgcgcgtcggcgctgcgctg
gaacggcacgagttgtttcccgagcgtgccaacatcggcttcatgcaggtattggactcg
caccatgcgcggctccgggtttacgaacgggggacgggggaaacccttgcctgcggcagc
ggagcctgcgccgcagcggtggtcgggatgttgcgaggggcattacaggaccccgtgcgc
atcgatttgccgggcggcgcgttgcggatcggctggcgggggcggggaacgccggtccat
atgagtggtcccgcggttaccgtgttcgaagggagcatagaagcatga

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