Methylococcus geothermalis: GNH96_05210
Help
Entry
GNH96_05210 CDS
T06585
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
metu
Methylococcus geothermalis
Pathway
metu00300
Lysine biosynthesis
metu00470
D-Amino acid metabolism
metu01100
Metabolic pathways
metu01110
Biosynthesis of secondary metabolites
metu01120
Microbial metabolism in diverse environments
metu01230
Biosynthesis of amino acids
Module
metu_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
metu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GNH96_05210 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GNH96_05210 (dapF)
Enzymes [BR:
metu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
GNH96_05210 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
QJD29419
UniProt:
A0A858Q6F6
LinkDB
All DBs
Position
1082442..1083269
Genome browser
AA seq
275 aa
AA seq
DB search
MLRFTKMQGLGNDFVVIDAIHQAVNLDAAGLRRLADRHYGIGCDQILLVEPPPSDEVDFR
YRIFNADGSEVAQCGNGARCFARFVRDKGLIDRDEIRVETASGRMVLRLEAGGEVRVDMG
VPRHAPAEVPLLAAEERLGYTVNIDGVDWTFGAVSMGNPHAVITVPDVDAAPVARVGAAL
ERHELFPERANIGFMQVLDSHHARLRVYERGTGETLACGSGACAAAVVGMLRGALQDPVR
IDLPGGALRIGWRGRGTPVHMSGPAVTVFEGSIEA
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgttttaccaagatgcagggactgggcaacgacttcgtcgtgatcgacgccatt
catcaggcggtcaacctggatgcggcgggattgcgccggctggccgaccggcattacggt
atcggctgcgaccagattctgctggtggagccgccgccgtcggacgaagtggatttccgt
taccggattttcaatgccgacggcagcgaggtggcgcaatgcggcaacggcgcgcgctgc
ttcgcccgcttcgtgcgcgacaagggtctcatcgaccgcgacgagatccgggtggaaacc
gcttccggccgcatggtgctgcggctggaggcgggcggcgaggtccgggtcgacatgggg
gtgccgcgccatgcgccggccgaagtgccgctgctggcggccgaagagcggctcggctac
acggtcaacatcgacggtgtagactggacattcggggccgtgtccatgggcaacccccat
gcggtgatcacggtacccgacgtcgacgcggcgcccgtggcgcgcgtcggcgctgcgctg
gaacggcacgagttgtttcccgagcgtgccaacatcggcttcatgcaggtattggactcg
caccatgcgcggctccgggtttacgaacgggggacgggggaaacccttgcctgcggcagc
ggagcctgcgccgcagcggtggtcgggatgttgcgaggggcattacaggaccccgtgcgc
atcgatttgccgggcggcgcgttgcggatcggctggcgggggcggggaacgccggtccat
atgagtggtcccgcggttaccgtgttcgaagggagcatagaagcatga
DBGET
integrated database retrieval system