Methylococcus geothermalis: GNH96_06135
Help
Entry
GNH96_06135 CDS
T06585
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
metu
Methylococcus geothermalis
Pathway
metu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
metu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GNH96_06135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metu03400
]
GNH96_06135
Enzymes [BR:
metu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
GNH96_06135
DNA repair and recombination proteins [BR:
metu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GNH96_06135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DNA_III_psi
Motif
Other DBs
NCBI-ProteinID:
QJD29590
UniProt:
A0A858Q6X8
LinkDB
All DBs
Position
complement(1266035..1266790)
Genome browser
AA seq
251 aa
AA seq
DB search
MCDDTDLKERLRLQYLDAMGIPVWELRRPPAELSAEPAPPPAATECGPEMPARESPVSKT
PATDDWDSLAAEVSACTRCELHCTRTQTVFGVGNRRATWMVIGEAPGEQEDLQGEPFVGR
AGQLLNEMLRAIGLKREDVYIANVLKCRPPRNRDPKPEEAEACESYLKRQIALLRPRVIL
AAGRIAAQNLLKTNEAIGKLRGRVFQYEGIPLVITYHPAYLLRSPLEKRKAWQDLLLAVE
TLNKSQVPLSS
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgacgatacggacctgaaagagcggctccgcctccagtatctggacgccatgggc
atcccggtctgggagctgcggcgtccgccggccgagctgagcgcggagccagctcccccg
ccggcggcgaccgaatgcggaccggagatgccggctcgggaatcgcccgtttccaaaacg
ccggcaacggacgattgggacagcctcgcggcggaagtctccgcctgtacccgctgcgaa
ctgcattgcacccgcacccagaccgtgttcggcgtcggcaaccgccgcgccacctggatg
gtgatcggcgaagcccccggcgaacaggaagacctgcagggcgaacccttcgtgggccgt
gccggccaactcctcaacgagatgctgcgggccatcggcttgaagcgcgaagacgtctac
atcgccaacgtcctcaaatgccgcccgcctcgcaaccgcgaccccaagccggaagaagcg
gaagcctgcgaaagctatctcaagcgccagatcgccctgcttcggccgcgcgtcatcctt
gccgcgggccgcatcgccgcgcaaaatctgctcaaaaccaacgaagccatcggcaagctg
cgtggccgggtattccagtacgaaggcatcccgctggtgatcacctaccaccccgcttac
ctgctgcgctcccccctggagaagcgcaaggcttggcaggacctgctgctggccgtcgaa
accctgaacaagtcacaagtcccattatcgagctag
DBGET
integrated database retrieval system
