KEGG   Methylococcus geothermalis: GNH96_06375
Entry
GNH96_06375       CDS       T06585                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
metu  Methylococcus geothermalis
Pathway
metu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:metu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    GNH96_06375 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:metu03400]
    GNH96_06375 (uvrB)
DNA repair and recombination proteins [BR:metu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     GNH96_06375 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      GNH96_06375 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd Helicase_C UvrB ResIII UVR DEAD AAA_30 AAA_22 UB2H
Other DBs
NCBI-ProteinID: QJD31342
UniProt: A0A858QBL8
LinkDB
Position
1309943..1311940
AA seq 665 aa
MLRSGYAPSGDQPEAIRRLIEGLNDGELHQTLLGVTGSGKTFTIANVISQVQRPTLILAP
NKTLAAQLYGEMKEFFPENSVEYFVSYYDYYQPEAYVPASDTYIEKDSSLNEHIEQMRLS
ATKALIERHDTIIVATVSSIYGLGEPASYFEMVLHLVRGDMIDHRSLIRRLAELQYTRNE
AELRRGTYRVRGDVIDIYPAESEKEALRVELFDDEIERLSLFDPLTGEILSRIARYTVYP
KTHYVTPREKLLQAVEEIKVELKERLEHLRSQHKLVEAQRLEQRTLFDIEIILEVGYCSG
IENYSRYLSGRSAGEPPPTLFDYLPDDALVVIDESHVTIPQLGAMYRGDRSRKETLVEFG
FRLPSALDNRPLKFDEFELRAPQRIYVSATPGPYERTHSGAVVEQVVRPTGLVDPEVEVR
PASTQVDDLLSEIRLRVQKGERVLVTTLTKRMAEDLTEYLMEHDVAVRYLHSDVDTVERV
EIIRDLRLGKFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSVVSLIQTIGRAARNL
HGKAILYGDKMTQSMQQAIGETERRRAKQIAYNETHGLIPRGITKSVTDILEVPIPGGGA
EGSRKSLARAAEPRSEYRLTKPAEAARLIKQLEEKMYAHARDLEFEEAARLRDEIQRIRE
SALMA
NT seq 1998 nt   +upstreamnt  +downstreamnt
gtgctgcggagcggatatgcgccatcgggtgatcagccggaggccatccggcgcctgatc
gagggcctgaacgacggggaactgcaccagaccctgctcggcgtgaccggctcgggcaag
accttcaccatcgccaacgtgatttcccaggttcagcgtccgaccctgatcctcgcgccc
aacaagacgctggcggcccagctttacggcgagatgaaggagttcttccccgagaactcg
gtggaatacttcgtttcctattacgactactaccagccggaggcctatgtgcccgcctcc
gacacctatatcgaaaaggattcctcgctgaacgagcacatcgagcagatgcggctgtcg
gcgaccaaggcgctgatcgagcggcacgacaccatcatcgtcgccacggtgtcctcgatc
tacggcctgggcgagccggcttcgtatttcgagatggtgctgcacctggtgcgcggcgac
atgatcgaccaccgcagcctgatccggcggctggccgagctccagtacacccgcaacgaa
gccgagctgcggcgcggcacctaccgggtccggggcgacgtgatcgacatctacccggcc
gagtcggagaaggaggcgctgcgggtcgagctgttcgacgacgagatcgagcggctgtcg
ctgttcgacccgttgaccggcgagattctttcccgcatcgcccgctacacggtctatccc
aagacccattacgtcacgccgagggaaaagctgctgcaggcggtggaagaaatcaaggtc
gagctgaaagagcggctggagcatctccgcagccagcacaagctggtggaagcccagcgg
ctggagcagcggaccctgttcgacatcgagatcatcctggaagtcggctattgctcgggc
atcgagaactactcgcgctatttgtcaggacgttctgccggcgagccgccgccgaccctg
ttcgattacttgccggacgatgcgctggtcgtgatcgacgagagccatgtcaccatcccg
caactgggcgcgatgtaccggggcgaccgttcccgcaaggaaacgctggtcgagttcggc
ttccggctgccgtcggcgctcgacaaccggccgttgaaattcgacgaattcgagctgcgc
gcgcctcagcgcatctatgtttcggccacgccggggccttatgagagaacacactccggc
gccgtggtggagcaggtcgtgcgccccaccggcctggtcgacccggaggtcgaggtccgg
ccggcatcgacccaggtcgacgacctgctgtcggagatccgcctgcgggttcaaaaaggc
gagcgcgtgctggtgaccacgctgaccaaacgcatggccgaggacctcaccgaatacctc
atggagcatgacgttgcggtgcgctacctgcattccgacgtggacaccgtggagcgcgtg
gagatcatccgcgatctccggctcggcaagttcgacgtgctggtgggcatcaacctcctg
cgggagggcctggacatccccgaggtgtcgctggtggccatcctcgacgccgacaaggaa
ggtttcctgcgctcggtggtctcgctgatccagaccatcggccgggccgcccgcaacctc
catggcaaggcgatcctgtatggcgacaagatgacgcagtccatgcagcaggccatcggc
gagaccgagcgccgccgtgccaaacagattgcctacaatgaaacgcatgggctgattccc
cggggcatcaccaaatccgtgacggacatcctggaagtgcccattccgggtggcggcgcc
gagggatcgcgaaagtcgctggcccgtgctgccgaaccacgctccgaatacaggttgacc
aagccggcagaggcggcccggctcatcaagcagctcgaagaaaagatgtacgcgcacgcc
cgcgatctggagttcgaggaggcggcgaggctgcgcgacgagattcagcggatccgcgag
agcgctctgatggcgtga

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