Methylococcus geothermalis: GNH96_06375
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Entry
GNH96_06375 CDS
T06585
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
metu
Methylococcus geothermalis
Pathway
metu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
metu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GNH96_06375 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metu03400
]
GNH96_06375 (uvrB)
DNA repair and recombination proteins [BR:
metu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GNH96_06375 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GNH96_06375 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_22
UB2H
Motif
Other DBs
NCBI-ProteinID:
QJD31342
UniProt:
A0A858QBL8
LinkDB
All DBs
Position
1309943..1311940
Genome browser
AA seq
665 aa
AA seq
DB search
MLRSGYAPSGDQPEAIRRLIEGLNDGELHQTLLGVTGSGKTFTIANVISQVQRPTLILAP
NKTLAAQLYGEMKEFFPENSVEYFVSYYDYYQPEAYVPASDTYIEKDSSLNEHIEQMRLS
ATKALIERHDTIIVATVSSIYGLGEPASYFEMVLHLVRGDMIDHRSLIRRLAELQYTRNE
AELRRGTYRVRGDVIDIYPAESEKEALRVELFDDEIERLSLFDPLTGEILSRIARYTVYP
KTHYVTPREKLLQAVEEIKVELKERLEHLRSQHKLVEAQRLEQRTLFDIEIILEVGYCSG
IENYSRYLSGRSAGEPPPTLFDYLPDDALVVIDESHVTIPQLGAMYRGDRSRKETLVEFG
FRLPSALDNRPLKFDEFELRAPQRIYVSATPGPYERTHSGAVVEQVVRPTGLVDPEVEVR
PASTQVDDLLSEIRLRVQKGERVLVTTLTKRMAEDLTEYLMEHDVAVRYLHSDVDTVERV
EIIRDLRLGKFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSVVSLIQTIGRAARNL
HGKAILYGDKMTQSMQQAIGETERRRAKQIAYNETHGLIPRGITKSVTDILEVPIPGGGA
EGSRKSLARAAEPRSEYRLTKPAEAARLIKQLEEKMYAHARDLEFEEAARLRDEIQRIRE
SALMA
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcggagcggatatgcgccatcgggtgatcagccggaggccatccggcgcctgatc
gagggcctgaacgacggggaactgcaccagaccctgctcggcgtgaccggctcgggcaag
accttcaccatcgccaacgtgatttcccaggttcagcgtccgaccctgatcctcgcgccc
aacaagacgctggcggcccagctttacggcgagatgaaggagttcttccccgagaactcg
gtggaatacttcgtttcctattacgactactaccagccggaggcctatgtgcccgcctcc
gacacctatatcgaaaaggattcctcgctgaacgagcacatcgagcagatgcggctgtcg
gcgaccaaggcgctgatcgagcggcacgacaccatcatcgtcgccacggtgtcctcgatc
tacggcctgggcgagccggcttcgtatttcgagatggtgctgcacctggtgcgcggcgac
atgatcgaccaccgcagcctgatccggcggctggccgagctccagtacacccgcaacgaa
gccgagctgcggcgcggcacctaccgggtccggggcgacgtgatcgacatctacccggcc
gagtcggagaaggaggcgctgcgggtcgagctgttcgacgacgagatcgagcggctgtcg
ctgttcgacccgttgaccggcgagattctttcccgcatcgcccgctacacggtctatccc
aagacccattacgtcacgccgagggaaaagctgctgcaggcggtggaagaaatcaaggtc
gagctgaaagagcggctggagcatctccgcagccagcacaagctggtggaagcccagcgg
ctggagcagcggaccctgttcgacatcgagatcatcctggaagtcggctattgctcgggc
atcgagaactactcgcgctatttgtcaggacgttctgccggcgagccgccgccgaccctg
ttcgattacttgccggacgatgcgctggtcgtgatcgacgagagccatgtcaccatcccg
caactgggcgcgatgtaccggggcgaccgttcccgcaaggaaacgctggtcgagttcggc
ttccggctgccgtcggcgctcgacaaccggccgttgaaattcgacgaattcgagctgcgc
gcgcctcagcgcatctatgtttcggccacgccggggccttatgagagaacacactccggc
gccgtggtggagcaggtcgtgcgccccaccggcctggtcgacccggaggtcgaggtccgg
ccggcatcgacccaggtcgacgacctgctgtcggagatccgcctgcgggttcaaaaaggc
gagcgcgtgctggtgaccacgctgaccaaacgcatggccgaggacctcaccgaatacctc
atggagcatgacgttgcggtgcgctacctgcattccgacgtggacaccgtggagcgcgtg
gagatcatccgcgatctccggctcggcaagttcgacgtgctggtgggcatcaacctcctg
cgggagggcctggacatccccgaggtgtcgctggtggccatcctcgacgccgacaaggaa
ggtttcctgcgctcggtggtctcgctgatccagaccatcggccgggccgcccgcaacctc
catggcaaggcgatcctgtatggcgacaagatgacgcagtccatgcagcaggccatcggc
gagaccgagcgccgccgtgccaaacagattgcctacaatgaaacgcatgggctgattccc
cggggcatcaccaaatccgtgacggacatcctggaagtgcccattccgggtggcggcgcc
gagggatcgcgaaagtcgctggcccgtgctgccgaaccacgctccgaatacaggttgacc
aagccggcagaggcggcccggctcatcaagcagctcgaagaaaagatgtacgcgcacgcc
cgcgatctggagttcgaggaggcggcgaggctgcgcgacgagattcagcggatccgcgag
agcgctctgatggcgtga
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integrated database retrieval system