Methylococcus geothermalis: GNH96_06630
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Entry
GNH96_06630 CDS
T06585
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
metu
Methylococcus geothermalis
Pathway
metu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
metu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GNH96_06630 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
metu03019
]
GNH96_06630 (recQ)
03400 DNA repair and recombination proteins [BR:
metu03400
]
GNH96_06630 (recQ)
Enzymes [BR:
metu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GNH96_06630 (recQ)
Messenger RNA biogenesis [BR:
metu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GNH96_06630 (recQ)
DNA repair and recombination proteins [BR:
metu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GNH96_06630 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
HTH_40
Helicase_C
Sigma70_r4_2
DUF6127
ResIII
Motif
Other DBs
NCBI-ProteinID:
QJD29673
UniProt:
A0A858Q787
LinkDB
All DBs
Position
1370291..1372450
Genome browser
AA seq
719 aa
AA seq
DB search
MSVDAVSPLKTLQTVFGYERFRGLQAEIIGQLLSGGDALVLMPTGGGKSLCYQIPALLRP
GTGVVVSPLIALMEDQVGALLQLGVKAAFLNSSLDFDTQRQVESRFLAGELDLLYVAPER
LLTERFLSVLDRVRIALFAIDEAHCVSQWGHDFRADYWQLSLLHQRFPAVPRIALTATAD
ERTRREIIERLGLDEARVFLGGFDRPNIRYAIGQKSNARQQLLDFIRREHEGDAGIVYCL
SRKKVEETAAWLCGKGLKALPYHAGLSAETRQHNQRRFLLEEGLIVVATIAFGMGIDKPN
VRFVAHLDLPKSLEAYYQETGRAGRDGLPANAWMVYGLQDVITLRSMVESSDADELHKRV
ERHKLEAMLGFCELTSCRRQTLLHYFGDRLEQPCGNCDNCLNPVQTWDATEAARKALSCV
YRSGQRFGAHYVIDLLLGKTSERVRGFGHDRLSTFGIGRELDDKQWLSVFRQLVTQGFLV
VDWEAHGALRLSPASRPLLKGEQTLFLRKDPETRKTAASARDTRRGAIRFSDPQDENLFQ
ALRGLRRQLADEQGVPPYVILHDAVLMEMVQRRPETHVQLARIPGIGERKLALYGDEFLE
LIREHSGQRGGGDIAGQTTAEESLALFRLGLGVEQIAARRELKPSTVYAHLAQAVARGAV
DALDVTGLSDEEAARIESVWRNLPQDRPAAIKPLFEALEGRYDYGVLRCLLVSWGALSN
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcgatgctgtcagcccgctgaaaacgctgcaaacggttttcggctacgagcgt
ttccgcggccttcaggccgagatcatcgggcagttgctgagcgggggcgacgccctggtg
ttgatgcccaccggtggcggcaagtcgctgtgctaccagattccggcgctgctgcggccg
ggtaccggggtggtggtctcgcccctgatcgcgctgatggaagaccaggtcggcgccctg
ctgcaattgggcgtgaaggccgcgttcctcaattccagcctggatttcgatacccagcgc
caggtggagagccgattcctggcgggcgagctggacctgctctacgtggcgccggagcgc
ctgttgaccgagcgtttcctaagcgtgctcgaccgggttcgcatcgcgctgttcgccatc
gacgaagcccattgtgtctcgcaatgggggcatgatttccgggccgattactggcagttg
tcgctgctgcaccagcgctttccggcggtcccccgcatcgccttgaccgcgaccgccgac
gagcggacccgccgggagatcatcgaacggctgggactggacgaggcccgggttttcctc
ggcggtttcgaccggcccaacatccgctacgccatcggccagaagtccaacgcccgccaa
cagttgctggacttcatccggcgcgagcacgagggcgacgccggcatcgtctactgcctg
tcgcgcaagaaggtcgaagaaaccgccgcttggctctgcggcaagggcctcaaggccttg
ccctaccatgcgggcctttcggccgaaacccgccagcacaaccagcgccgcttcctgctc
gaggaagggctgatcgtggtggcgaccatcgccttcggcatgggcatcgacaagcccaac
gtgcgcttcgtggcgcatctggacctgccgaagagcctggaggcgtattaccaggaaacc
gggcgcgccggccgcgacgggctgcccgccaatgcctggatggtgtacgggctgcaggac
gtcatcaccctgcgcagcatggtcgaatcctccgacgccgacgaactgcacaagcgggtg
gagcgccacaagctcgaggccatgctggggttctgcgagctgacgtcctgccgccgccag
accctgctgcactatttcggcgaccggctggaacagccttgcggcaactgcgacaactgc
ctcaacccggtgcagacctgggatgcgaccgaggccgcgcgcaaggccttgtcctgcgtc
tatcgcagcggccagcgcttcggcgcccattacgtcatcgacctgctgctcggcaagacc
tccgaacgcgtccgcggcttcggccacgaccggctcagcaccttcggcatcggccgggag
ctggacgacaagcaatggctctcggtgttccgccaactggtcacccagggttttctcgtg
gtcgactgggaagcccacggcgccctgcggctgagccctgccagccgccccctgctcaag
ggcgaacagaccctgttcctgcgcaaggacccagaaaccaggaagactgccgcgtccgcc
cgcgacacacggcgcggcgcgatccgcttttccgatcctcaagacgaaaacctgttccag
gccctgcgcggcctgcgccgtcaactggccgacgaacagggcgtcccgccttatgtcatc
ctgcacgacgcggtgctgatggaaatggtccagcgccgcccggaaactcacgtccagttg
gcgcgaatccccggtatcggcgagcgcaagctggcgctgtacggcgacgaattcctggaa
ctgatccgcgagcattccggccagcgcggcggcggggacatcgcggggcagaccacggcg
gaggaaagcctggcgctgttccggctcggcctcggcgtcgagcagatcgccgcgcggcgt
gaactcaagccttccaccgtctatgcccatctggcccaggccgtggcccggggcgccgtg
gatgcgctggatgtgactgggctttcggacgaggaggccgcgcggatcgaaagcgtgtgg
aggaacctgccccaggaccggccggccgccatcaagcccctgttcgaggcgctggaaggg
cgctacgactatggcgtgttgcgttgcctgctggtttcctggggcgcattgtcaaactga
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